Sequence 1: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038944599.1 | Gene: | Robo2 / 84409 | RGDID: | 620167 | Length: | 1625 | Species: | Rattus norvegicus |
Alignment Length: | 1508 | Identity: | 456/1508 - (30%) |
---|---|---|---|
Similarity: | 660/1508 - (43%) | Gaps: | 265/1508 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MDLRFVFIVF-----LLKWTHA--------------QGSHPPRIVEHPIDTTVPRHEPATLNCKA 46
Fly 47 EGSPTPTIQWYKDGVPL---KILPGSHRITLPAGGLFFLKVVNSRR-ETDAGIYWCEAKNELGVA 107
Fly 108 RSRNATLQVAVLRDEFRLEPQNTRIAQGDTALLECAAPRGIPEPTVTWKKGGQKLDLEGSKRVRI 172
Fly 173 VDGGNLAIQDARQTDEGQYQCIAKNPVGVRESSLATLKVHVKPYIIRGPHDQTVLEGASVTFPCR 237
Fly 238 VGGDPMPDVLWLRTASGGNMPLDRVSVLEDRSLRLERVTIADEGEYSCEADNVVGAITAMGTLTV 302
Fly 303 ----YAPPKFIQRPASKSVELGADTSFECRAIGNPKPTIFWTIKNNSTLIFPGAP--PLDRFHSL 361
Fly 362 NTEEGHSILTLTRFQRTDKDLVILCNAMNEVASITSRVQLSL-DSQEDRPPPIIISGPVNQTLPI 425
Fly 426 KSLATLQCKAIGLPSPTISWYRDGIP-VQPSSKLNITTSGDLIISDLDRQQDQGLYTCVASSRAG 489
Fly 490 KSTWSGFLRIELPTNPNIKFYRAPEQTKCPSAPGQPKILNATASALTIVWPTSDKAGASSFL--- 551
Fly 552 GYSVEMYCTNQSRTWIPIASRLSEPIFTVESLTQGAAYMFIVRAENSLGFSPPSPISEPITAGKL 616
Fly 617 VGVRDGSESTGTSQLLLSDVETLLQANDVVELLEANASDSTTARLSWDID-SGQYIEGFYLYARE 680
Fly 681 LHSSEYKMV--TLLNKGQGLSSCTVPGLAKASTYEFFLVPFYKSIVGKPSNSRRMRTLEDVPEAP 743
Fly 744 PYGMEAI---QFNRTSVFLKWLPPQPNRTRNGILTSYNVVVKGLDVHNTTRIFKNMTIDAAAPTL 805
Fly 806 LLANLTTGVTYYIAVAAATRVGVGPFSKPAVLRIDARTQSLDTGYTRYPISRDIADDFLTQTWFI 870
Fly 871 VLLGSIIAIIVF---------------LLGALVLFKR---------------------YQFIKQ- 898
Fly 899 ---TSL---GSLHGNHAIGT------------------VRK------------FPTLPLNG---- 923
Fly 924 ----GGAVGA-----------GGSNSTAAA---------GQSGHGLWIDPTSGVWRQAAGGGNPG 964
Fly 965 GVGSCTTKEQLPGYAQATAQQ--GQQPTL-LPDY---ERLS---PLNMPDYAEVACSTFKSPTHG 1020
Fly 1021 APPMGGGGGGQSASLYDSCGAYATT-NVVANVKLYQNRYATKPNQSSGSNNNNH----QGNDYQS 1080
Fly 1081 TGMYSAPP-----SAHYGCLEPKQQQQQQQPNLMTTSTA----------STAILTNSPAKVKKIN 1130
Fly 1131 ITENKMDQLEGKSERTNPFN-QQQQLLLASNALK-----QGLGAYANTTLAAQMASGGGAGTLRR 1189
Fly 1190 QRQPKTLYKSENNILGKSGLRQNTMNASV-GAPSNGQMDFLTGGPPSEGGDFSGLGLCNSTNQLL 1253
Fly 1254 NDWASSASIAAPGDYHFGSKQPSKQHLYVKAK------DGTWSAVSSDAYQSFKHQQQHHPFLAG 1312
Fly 1313 SGDNTKSLASVNS 1325 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 59/98 (60%) |
I-set | 23..116 | CDD:254352 | 58/96 (60%) | ||
I-set | 122..211 | CDD:254352 | 39/88 (44%) | ||
Ig | 125..211 | CDD:299845 | 37/85 (44%) | ||
I-set | 215..302 | CDD:254352 | 34/86 (40%) | ||
Ig | 232..302 | CDD:299845 | 27/69 (39%) | ||
I-set | 306..401 | CDD:254352 | 32/96 (33%) | ||
Ig | 320..411 | CDD:299845 | 32/93 (34%) | ||
I-set | 412..492 | CDD:254352 | 36/80 (45%) | ||
IGc2 | 429..489 | CDD:197706 | 26/60 (43%) | ||
FN3 | 519..612 | CDD:238020 | 29/95 (31%) | ||
FN3 | 644..735 | CDD:238020 | 23/93 (25%) | ||
fn3 | 743..832 | CDD:278470 | 31/91 (34%) | ||
Robo2 | XP_038944599.1 | IgC_1_Robo | 54..152 | CDD:409490 | 58/97 (60%) |
Ig strand B | 71..75 | CDD:409490 | 2/3 (67%) | ||
Ig strand C | 84..88 | CDD:409490 | 2/3 (67%) | ||
Ig strand E | 111..115 | CDD:409490 | 2/3 (67%) | ||
Ig strand F | 130..135 | CDD:409490 | 2/4 (50%) | ||
Ig strand G | 144..147 | CDD:409490 | 2/2 (100%) | ||
Ig | 159..244 | CDD:416386 | 38/86 (44%) | ||
Ig strand A | 159..162 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 164..168 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 172..179 | CDD:409353 | 4/6 (67%) | ||
Ig strand C | 187..192 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 194..197 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 203..207 | CDD:409353 | 2/4 (50%) | ||
Ig strand E | 209..215 | CDD:409353 | 3/5 (60%) | ||
Ig strand F | 222..230 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 233..244 | CDD:409353 | 5/10 (50%) | ||
Ig | 251..333 | CDD:416386 | 33/83 (40%) | ||
Ig strand A | 251..254 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 256..260 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 263..272 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 278..283 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 286..289 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 292..297 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 298..305 | CDD:409353 | 3/6 (50%) | ||
Ig strand F | 312..320 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 323..333 | CDD:409353 | 4/9 (44%) | ||
IgI_4_Robo | 342..439 | CDD:409391 | 34/101 (34%) | ||
Ig strand B | 358..362 | CDD:409391 | 1/3 (33%) | ||
Ig strand C | 371..375 | CDD:409391 | 1/3 (33%) | ||
Ig strand E | 401..405 | CDD:409391 | 1/7 (14%) | ||
Ig strand F | 415..420 | CDD:409391 | 2/5 (40%) | ||
Ig strand G | 428..431 | CDD:409391 | 0/2 (0%) | ||
IgI_5_Robo | 446..532 | CDD:409544 | 38/86 (44%) | ||
Ig strand B | 462..466 | CDD:409544 | 2/3 (67%) | ||
Ig strand C | 475..479 | CDD:409544 | 2/3 (67%) | ||
Ig strand E | 498..502 | CDD:409544 | 2/3 (67%) | ||
Ig strand F | 512..517 | CDD:409544 | 3/4 (75%) | ||
Ig strand G | 525..528 | CDD:409544 | 1/2 (50%) | ||
FN3 | 549..642 | CDD:238020 | 29/96 (30%) | ||
FN3 | 673..758 | CDD:238020 | 22/91 (24%) | ||
FN3 | 767..859 | CDD:238020 | 32/96 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 106 | 1.000 | Domainoid score | I6432 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9043 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101537 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.810 |