Sequence 1: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011532283.1 | Gene: | ROBO2 / 6092 | HGNCID: | 10250 | Length: | 1597 | Species: | Homo sapiens |
Alignment Length: | 1495 | Identity: | 451/1495 - (30%) |
---|---|---|---|
Similarity: | 668/1495 - (44%) | Gaps: | 270/1495 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MDLRFVFIVF-----LLKWTHA--------------QGSHPPRIVEHPIDTTVPRHEPATLNCKA 46
Fly 47 EGSPTPTIQWYKDGVPL---KILPGSHRITLPAGGLFFLKVVNSRR-ETDAGIYWCEAKNELGVA 107
Fly 108 RSRNATLQVAVLRDEFRLEPQNTRIAQGDTALLECAAPRGIPEPTVTWKKGGQKLDLEGSKRVRI 172
Fly 173 -VDGGNLAIQDARQTDEGQYQCIAKNPVGVRESSLATLKVHVKPYIIRGPHDQTVLEGASVTFPC 236
Fly 237 RVGGDPMPDVLWLRTASGGNMPLDRVSVLEDRSLRLERVTIADEGEYSCEADNVVGAITAMGTLT 301
Fly 302 V----YAPPKFIQRPASKSVELGADTSFECRAIGNPKPTIFWTIKNNSTLIFPGAP--PLDRFHS 360
Fly 361 LNTEEGHSILTLTRFQRTDKDLVILCNAMNEVASITSRVQLSL-DSQEDRPPPIIISGPVNQTLP 424
Fly 425 IKSLATLQCKAIGLPSPTISWYRDGIPVQ-PSSKLNITTSGDLIISDLDRQQDQGLYTCVASSRA 488
Fly 489 GKSTWSGFLRIELPTNPNIKFYRAPEQTKCPSAPGQPKILNATASALTIVWP--TSDKAGASSFL 551
Fly 552 GYSVEMYCTNQSRTWIPIASRLSEPIFTVESLTQGAAYMFIVRAENSLGFSPPSPISEPITAGKL 616
Fly 617 VGVRDGSESTGTSQLLLSDVETLLQANDVVELLEANASDSTTARLSWDID-SGQYIEGFYLYARE 680
Fly 681 LHSSEYKMVTLLNKGQGLS-------SCTVPGLAKASTYEFFLVPFYKSIVGKPSNSRRMRTLED 738
Fly 739 VPEAPPYGMEAI---QFNRTSVFLKWLPPQPNRTRNGILTSYNVVVKGLDVHNTTRIFKNMTIDA 800
Fly 801 AAPTLLLANLTTGVTYYIAVAAATRVGVGPFSKPAVLRIDARTQSLDTGYTRYPISRDIADDFLT 865
Fly 866 QTWFIVLLGSIIAIIVFLLG-ALVLFKRYQFIKQTSLGSLHGNHAIGTVRKFPTLPLNGG--GAV 927
Fly 928 GAGG-----------------SNSTAA---AGQSGHGLWIDPTSGVWRQAAGGGNPGGVGSC--- 969
Fly 970 TTKE------------------------------QLP-----------------GYAQATAQQGQ 987
Fly 988 QPTL-LPDY---ERLS---PLNMPDYAEVACSTFKSPTHGAPPMGGGGGGQSASLYDSCGAYATT 1045
Fly 1046 NVVANVKLYQNRYATKPNQSSGSNNNN-----------------HQGNDYQSTGMYS---APP-- 1088
Fly 1089 ---SAHYGCLEPKQQQQQQQPNLMTTSTA----------STAILTNSPAKVKKINITENKMDQLE 1140
Fly 1141 GKSERTNPFNQQQQL--LLASNALKQ----GLGAYANTTLAAQMASGGGAGTLRRQRQPKTLYKS 1199
Fly 1200 ENNILGKSGLRQNTMNASV-GAPSNGQMDFLTGGPPSEGGDFSGLGLCNSTNQLLNDWASSASIA 1263
Fly 1264 APGDYHFGSKQPSKQHLYVKAK------DGTWSAVSSDAYQSFKHQQQHHPFLAGSGDNTKSLAS 1322
Fly 1323 1322 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 59/98 (60%) |
I-set | 23..116 | CDD:254352 | 58/96 (60%) | ||
I-set | 122..211 | CDD:254352 | 39/89 (44%) | ||
Ig | 125..211 | CDD:299845 | 37/86 (43%) | ||
I-set | 215..302 | CDD:254352 | 34/86 (40%) | ||
Ig | 232..302 | CDD:299845 | 27/69 (39%) | ||
I-set | 306..401 | CDD:254352 | 32/96 (33%) | ||
Ig | 320..411 | CDD:299845 | 32/93 (34%) | ||
I-set | 412..492 | CDD:254352 | 36/80 (45%) | ||
IGc2 | 429..489 | CDD:197706 | 26/60 (43%) | ||
FN3 | 519..612 | CDD:238020 | 30/94 (32%) | ||
FN3 | 644..735 | CDD:238020 | 22/98 (22%) | ||
fn3 | 743..832 | CDD:278470 | 32/91 (35%) | ||
ROBO2 | XP_011532283.1 | Ig1_Robo | 53..152 | CDD:143317 | 59/98 (60%) |
Ig | 160..244 | CDD:325142 | 37/86 (43%) | ||
Ig | 265..333 | CDD:325142 | 27/69 (39%) | ||
Ig4_Robo | 355..444 | CDD:143203 | 32/93 (34%) | ||
IG | 451..532 | CDD:214652 | 35/81 (43%) | ||
FN3 | 549..642 | CDD:238020 | 30/95 (32%) | ||
FN3 | 673..758 | CDD:238020 | 21/95 (22%) | ||
FN3 | 766..859 | CDD:238020 | 34/97 (35%) | ||
PTN13_u3 | <1374..>1431 | CDD:318742 | 11/39 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 104 | 1.000 | Domainoid score | I6690 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4222 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0.917438 | Normalized mean entropy | S5483 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8568 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101537 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.620 |