Sequence 1: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017453545.1 | Gene: | Robo1 / 58946 | RGDID: | 61941 | Length: | 1687 | Species: | Rattus norvegicus |
Alignment Length: | 1376 | Identity: | 413/1376 - (30%) |
---|---|---|---|
Similarity: | 620/1376 - (45%) | Gaps: | 267/1376 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 QGSHPPRIVEHPIDTTVPRHEPATLNCKAEGSPTPTIQWYKDGVPL---KILPGSHRITLPAGGL 79
Fly 80 FFLKVVNSRR-ETDAGIYWCEAKNELGVARSRNATLQVAVLRDEFRLEPQNTRIAQGDTALLECA 143
Fly 144 APRGIPEPTVTWKKGGQKLDLEGSKRVRI-VDGGNLAIQDARQTDEGQYQCIAKNPVGVRESSLA 207
Fly 208 TLKVHVKPYIIRGPHDQTVLEGASVTFPCRVGGDPMPDVLWLRTASGGNMPLDRVSVLEDRSLRL 272
Fly 273 ERVTIADEGEYSCEADNVVGAITAMGTLTVYA---PPKFIQRPASKSVELGADTSFECRAIGNPK 334
Fly 335 PTIFWTIKNNSTLIFPGAPP--LDRFHSLNTEEGHSILTLTRFQRTDKDLVILCNAMNEVASITS 397
Fly 398 RVQLSL-DSQEDRPPPIIISGPVNQTLPIKSLATLQCKAIGLPSPTISWYRDGIPVQ-PSSKLNI 460
Fly 461 TTSGDLIISDLDRQQDQGLYTCVASSRAGKSTWSGFLRIE---------LPTNPNIKFYRAPEQT 516
Fly 517 KCPSAPGQPKILNATASALTIVWPTSDKAGASSFLGYSVEMYCTNQSRTWIPIASRLSEPIFTVE 581
Fly 582 SLTQGAAYMFIVRAENSLGFSPPSPISEPITAGKLVGVRDGSESTGTSQLLLSDVETLLQANDVV 646
Fly 647 ELLEANASDSTTARLSWDID-SGQYIEGFYLYARELHSS--EYKMVTLLNKGQGLSSCTVPGLAK 708
Fly 709 ASTYEFFLVPFYKSIVGKPSNSRRMRTLEDVPEAPPYGMEAIQ--FNRTSVFLKWLPPQPNRTRN 771
Fly 772 GILTSYNVVVKGLDVHNTTRIFKNMTIDAAAPTLLLANLTTGVTYYIAVAAATRVGVGPFSKPAV 836
Fly 837 LRIDARTQSLDTGYTRYPISRDIADDFLTQTWFIVLLGSIIAIIVFLLGALVLFKRYQFIKQTSL 901
Fly 902 GSLHGNHAIGTVRKFPTLPL-------NGGGAVGAGGSNSTAAAGQSGHGLWIDPTSGVWRQAAG 959
Fly 960 GGNPGGVGSCTTKEQLPGYAQATAQQGQQPTLLPDYER---------------LSPLNMPD---Y 1006
Fly 1007 AEVACS-------TFKSPT---------HGAPPMGGGGGGQSASLYDSCGAYATTNVVANVKLYQ 1055
Fly 1056 NRYATKPNQSSGSNNNNHQGNDYQSTGMYSAPPSAHYGCLEPKQQQQQQQP---NLMTTSTASTA 1117
Fly 1118 ILTNSPAKVKKINITENKMDQLEGKSERTN-------PFNQQQQLLLASNALKQGLGAYANTTLA 1175
Fly 1176 AQMASGGGAGTLRRQRQPKTLYKSENNILGKSGLRQNTMNASVGAPSNGQMDF--LTGGPPSEGG 1238
Fly 1239 DFSGLGLCNSTNQLLN-DWASSASIAAPGDYHFGSKQPSKQHLY------VKAKDG----TWSAV 1292
Fly 1293 SSDAYQSFKHQ 1303 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 57/98 (58%) |
I-set | 23..116 | CDD:254352 | 56/96 (58%) | ||
I-set | 122..211 | CDD:254352 | 41/89 (46%) | ||
Ig | 125..211 | CDD:299845 | 39/86 (45%) | ||
I-set | 215..302 | CDD:254352 | 30/86 (35%) | ||
Ig | 232..302 | CDD:299845 | 26/69 (38%) | ||
I-set | 306..401 | CDD:254352 | 34/96 (35%) | ||
Ig | 320..411 | CDD:299845 | 33/93 (35%) | ||
I-set | 412..492 | CDD:254352 | 34/80 (43%) | ||
IGc2 | 429..489 | CDD:197706 | 25/60 (42%) | ||
FN3 | 519..612 | CDD:238020 | 29/92 (32%) | ||
FN3 | 644..735 | CDD:238020 | 22/93 (24%) | ||
fn3 | 743..832 | CDD:278470 | 29/90 (32%) | ||
Robo1 | XP_017453545.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 106 | 1.000 | Domainoid score | I6432 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4222 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2206 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9043 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101537 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
11 | 10.670 |