DRSC/TRiP Functional Genomics Resources

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Protein Alignment robo3 and tutl

DIOPT Version :10

Sequence 1:NP_608592.2 Gene:robo3 / 33314 FlyBaseID:FBgn0041097 Length:1342 Species:Drosophila melanogaster
Sequence 2:NP_001303307.1 Gene:tutl / 46015 FlyBaseID:FBgn0010473 Length:1536 Species:Drosophila melanogaster


Alignment Length:1508 Identity:314/1508 - (20%)
Similarity:496/1508 - (32%) Gaps:542/1508 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVFLLK---------WTHAQGSHPPRIVEHPIDTT-VPRHEPATLNCKAEGSPTPTIQWYKDGVP 62
            :|||.:         |.|.....|||....|.|.. |...:...|||:|:|:|||.|.||||..|
  Fly   229 VVFLNRDPKQHKNGTWFHLDVHAPPRFSVTPEDIIYVNLGDSIILNCQADGTPTPEILWYKDANP 293

  Fly    63 LKILPGSHRITLPAGGLF----FLKVVNSRRETDAGIYWCEAKNELGVARSRNATLQV---AVLR 120
            :.  |.      |..|:|    .|::...|.| |.|.|.|.|:|..|.. |..|.:.:   ||: 
  Fly   294 VD--PS------PTVGIFNDGTELRISTIRHE-DIGEYTCIARNGEGQV-SHTARVIIAGGAVI- 347

  Fly   121 DEFRLEPQNTRIAQGDTALLECAAPRGIPEPTVTWKKGGQKL----DLEGSKRVRIVDGGNLAIQ 181
               .:.|.|....:|:..:..|.|.......||.|.:.|..:    .||  .||.|...|:|.|.
  Fly   348 ---MVPPTNQTKLEGEKVIFSCEAKAMPGNVTVRWYREGSPVREVAALE--TRVTIRKDGSLIIN 407

  Fly   182 DARQTDEGQYQCIAKNPVGVRESSLATLKVHVKPYIIRGPHDQTVLEGASVTFPCRVGGDP-MPD 245
            ..:..|.|||.|...|.:|..:|:.|.|.|.....:...|..|.:....:....|.:...| :..
  Fly   408 PIKPDDSGQYLCEVTNGIGDPQSASAYLSVEYPAKVTFTPTVQYLPFRLAGVVQCYIKSSPQLQY 472

  Fly   246 VLWLRTASGGNMPLDR----------VSVLEDRSLRLERVTIADEGEYSCEADNVVGAITAMGTL 300
            |.|.:         |:          :.|:.:.||...||....:|:|:|...|..|...|.|.:
  Fly   473 VTWTK---------DKRLLEPYQMKDIVVMANGSLLFTRVNEEHQGQYACTPYNAQGTAGASGVM 528

  Fly   301 TVYA--PPKF-------IQRPASKSVELGADTSFECRAIGNPKPTIFWTIKNNSTLIFPGAPPLD 356
            .|..  ||.|       .||....|||:..|.   ..|.|..:|||.|                 
  Fly   529 DVLVRKPPAFTVEPETLYQRKVGDSVEMHCDA---LEAEGTERPTIKW----------------- 573

  Fly   357 RFHSLNTEEGHSI--------------LTLTRFQRTDKDLVILCNAMNEVASITSRVQLSLDSQE 407
                 ..:||..:              :|:...:|.|.. ...|...||||::.:..||.::..:
  Fly   574 -----QRQEGEQLTESQRNRIKISGGNITIENLRREDFG-YYQCVVSNEVATLMAVTQLVIEGTQ 632

  Fly   408 DRPPPIIISGPVNQTLPIKSLATLQCKAIGLP----------SPTISWYRDG-------IPVQPS 455
            .. .|..|:|...:     |..|||    .||          ..|| |:|:.       |.|.||
  Fly   633 PH-APYNITGKATE-----SSITLQ----WLPGYSGGSEYKQDYTI-WFREAGVNDWQTISVTPS 686

  Fly   456 SKLNITTS-------------GDLIISDLDRQQDQGLYTCVASSRAGKSTWSGFLRIELPTNPNI 507
            ....:|.:             |..::.|       |:.:.|.:.|..:...:....::..|.|..
  Fly   687 GSTQVTINGLASGTTYEFQVVGRNVLGD-------GMMSKVMTVRTLEDAPAAPRNVKAATQPPD 744

  Fly   508 KF---------------------------YRAPE-QTKCPSAPGQPKILNAT--ASALTIVWPTS 542
            .|                           |..|: :.|.|. ||.|:.::.|  ::...|.|.:.
  Fly   745 SFFQLMPDEADLLAYFDIYFHTDSRGTLVYSPPKLRVKGPK-PGPPRNVSVTEVSNGFLITWQSP 808

  Fly   543 -DKAGASSFLGYSVEMYCTNQSRTWIPIASRLSEPIFTVESLTQGAAYMFIVRAENSLGFSPPSP 606
             ::|....|  |:::.....|.:|......|..|..:.|::|..|..|.|.|.|.:...:.....
  Fly   809 LERAHIVKF--YTIKYRTDAQWKTLNRGQIRPEETQYLVKNLVGGRTYYFRVLANSEKSYESSDE 871

  Fly   607 ISEPITAGKLVGVRDGSESTGTSQLLLSDVETLLQANDVVELLEANASDSTTARLSWDIDSGQYI 671
            :..|:.|    .|:..:.:.|....:|..:..::.:...|::....                   
  Fly   872 VKFPVPA----RVKHKAITAGVVGGILFFIVAIILSVCAVKICNKR------------------- 913

  Fly   672 EGFYLYARELHSSEYKMVT---------------LLNKGQG-LSSCTVPGLAKASTYEFFLVPFY 720
                  .|.....|:.||.               |.|:..| :||..|| |.|           |
  Fly   914 ------KRRKQEKEFNMVACRITDARNIAANNHHLHNRSTGSISSGQVP-LKK-----------Y 960

  Fly   721 KSIVGKPSNSRRMRTLEDVPEAPPYGMEAIQFNRTSVFLKWLPPQPNRTRN--GILTSYNV---- 779
            |        ..|:.:|..:..|               .|.|:.| |:|..|  .|.:|.|:    
  Fly   961 K--------QTRISSLTAILIA---------------ILHWIWP-PDRCTNCHSIYSSPNLEDGD 1001

  Fly   780 -----------------VVKG---LDVHNTTRI-FKNMTIDAAAPTLLLANLTTGVTYYIAVAAA 823
                             .:.|   |||...::: :...|:::       .|:..           
  Fly  1002 EDDGGGGRRRSVSRIQRSLDGRFVLDVEGVSKLGYSQQTLES-------GNVDV----------- 1048

  Fly   824 TRVGVGPFSKPAVLRIDARTQSLDTGYTRYPISRDIADDFLT--QTWFIVLLGSIIAIIV----- 881
              |..|.|.: ....:..::.|.|.|:    :||   .:|:|  .:|...|:.|...:.:     
  Fly  1049 --VDGGLFER-RNSNVSQKSSSDDGGF----LSR---RNFITARASWRRPLVASSSQLSLQSAAD 1103

  Fly   882 ----FLLGAL--------------------VLFKRYQFIKQ--TSLGSLHGN-------HAIGTV 913
                ||.|.|                    |...|||.:.:  ||..:|:||       | |.|:
  Fly  1104 SARGFLQGLLKIGAKQSAVPPNSQSYFDEAVSGARYQNVLRPYTSSNNLYGNADRSRPLH-INTI 1167

  Fly   914 -----------------RKFPTLP-----------LNGGGAVGAGGSN----STA----AAGQSG 942
                             |.|.:.|           |:.||: ||..::    ||.    :|.:|.
  Fly  1168 SGSLSQQQQLYTPSRISRIFSSSPQQLQPHHQQLLLSSGGS-GAYPTHFSDLSTVYPPNSAERSS 1231

  Fly   943 HGLWIDPTSGVWRQAAGGGNPGGVGSCTTKEQLPGY--AQATAQQGQQPTLLPDYERLSPLNMPD 1005
            |.|     |..:|..:              ::||..  .|...::.||....|..:...||.:| 
  Fly  1232 HNL-----SSRYRYYS--------------QELPSLRTIQEETRRQQQQKQHPLEDHFVPLQLP- 1276

  Fly  1006 YAEVACSTFKSPTHGAPPMGGGGGGQSASLYDSCGAYATTN---VVANVKLYQNRY--------- 1058
                           :||       ...|.|.|..:|....   ...:.:|:.||.         
  Fly  1277 ---------------SPP-------SWRSYYQSQASYRPRTRWYPRHHSRLFSNRQQQHEMLSPL 1319

  Fly  1059 -----------------ATKPNQSSGS-----NNNNHQG--NDYQSTGMYSAPP-----SAHYGC 1094
                             |:..::||.|     |.:||.|  ::::....|.|||     |.::| 
  Fly  1320 PQLNLNLRNSMNPGGLEASPESRSSSSGFGSKNTSNHPGSTSEWRLLPPYRAPPSPPKHSGYFG- 1383

  Fly  1095 LEPKQQQQQQQPN---------------------LMTTSTASTAILTNSPAKVKKINITENKMDQ 1138
               .||.|.|.|:                     :...:.|:.:.|..:|..|        .:..
  Fly  1384 ---GQQAQGQTPHGSYSYPRATTPPYTMAHWLEMISRLNAATDSNLPKAPCPV--------DVGS 1437

  Fly  1139 LEGKSERTNPFNQQQQLLLASNALKQGLGAYANT------TLAAQMAS--------GGGAGTLRR 1189
            ::|..|    |:.......||:.|::.|..:.:|      ||.....|        ||||   |:
  Fly  1438 VDGHYE----FDPATPTPSASSMLREDLNLHIDTHPYHHHTLGPLSGSLLHSHAPYGGGA---RK 1495

  Fly  1190 QRQ-PKTLYKSEN 1201
            ||. |..|.:.:|
  Fly  1496 QRSLPAHLPRYDN 1508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
robo3NP_608592.2 Ig 23..117 CDD:472250 35/101 (35%)
Ig strand B 40..44 CDD:409353 1/3 (33%)
Ig strand C 53..57 CDD:409353 1/3 (33%)
Ig strand E 77..81 CDD:409353 2/7 (29%)
Ig strand F 95..100 CDD:409353 2/4 (50%)
Ig strand G 109..112 CDD:409353 1/2 (50%)
Ig 124..211 CDD:472250 27/90 (30%)
Ig strand B 138..142 CDD:409353 0/3 (0%)
Ig strand C 152..156 CDD:409353 2/3 (67%)
Ig strand E 176..180 CDD:409353 2/3 (67%)
Ig strand F 190..195 CDD:409353 3/4 (75%)
Ig strand G 204..207 CDD:409353 1/2 (50%)
Ig 218..302 CDD:472250 19/94 (20%)
Ig strand B 232..236 CDD:409353 0/3 (0%)
Ig strand C 245..249 CDD:409353 1/3 (33%)
Ig strand E 268..272 CDD:409353 2/3 (67%)
Ig strand F 282..287 CDD:409353 2/4 (50%)
Ig strand G 295..298 CDD:409353 1/2 (50%)
Ig 307..403 CDD:472250 25/116 (22%)
Ig strand B 323..327 CDD:409353 0/3 (0%)
Ig strand C 336..340 CDD:409353 2/3 (67%)
Ig strand E 366..372 CDD:409353 1/19 (5%)
Ig strand F 382..388 CDD:409353 1/5 (20%)
Ig strand G 396..399 CDD:409353 0/2 (0%)
Ig 413..497 CDD:472250 22/113 (19%)
Ig strand B 429..433 CDD:409353 2/3 (67%)
Ig strand C 442..446 CDD:409353 2/3 (67%)
Ig strand E 464..468 CDD:409353 1/3 (33%)
Ig strand F 479..484 CDD:409353 0/4 (0%)
Ig strand G 492..495 CDD:409353 0/2 (0%)
FN3 519..612 CDD:238020 22/95 (23%)
FN3 644..735 CDD:238020 17/106 (16%)
fn3 743..832 CDD:394996 17/115 (15%)
tutlNP_001303307.1 V-set 138..250 CDD:462230 5/20 (25%)
I-set 253..341 CDD:400151 35/97 (36%)
Ig strand B 271..275 CDD:409353 1/3 (33%)
Ig strand C 284..288 CDD:409353 1/3 (33%)
Ig strand E 308..311 CDD:409353 1/2 (50%)
Ig strand F 321..326 CDD:409353 2/4 (50%)
Ig strand G 334..337 CDD:409353 1/2 (50%)
Ig 346..437 CDD:472250 28/96 (29%)
Ig strand B 362..366 CDD:409353 0/3 (0%)
Ig strand C 376..380 CDD:409353 2/3 (67%)
Ig strand E 402..406 CDD:409353 2/3 (67%)
Ig strand F 416..421 CDD:409353 3/4 (75%)
Ig strand G 430..433 CDD:409353 1/2 (50%)
Ig <459..530 CDD:472250 17/79 (22%)
Ig strand B 459..462 CDD:409353 0/2 (0%)
Ig strand C 471..476 CDD:409353 1/4 (25%)
Ig strand E 496..500 CDD:409353 2/3 (67%)
Ig strand F 510..515 CDD:409353 2/4 (50%)
Ig strand G 523..526 CDD:409353 1/2 (50%)
Ig_3 535..615 CDD:464046 21/105 (20%)
FN3 633..725 CDD:238020 22/109 (20%)
FN3 786..874 CDD:238020 20/89 (22%)

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