Sequence 1: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038937330.1 | Gene: | Robo3 / 315564 | RGDID: | 1311018 | Length: | 1451 | Species: | Rattus norvegicus |
Alignment Length: | 1471 | Identity: | 408/1471 - (27%) |
---|---|---|---|
Similarity: | 612/1471 - (41%) | Gaps: | 289/1471 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 PRIVEHPIDTTVPRHEPATLNCKAEGSPTPTIQWYKDGVPLKIL---PGSHRITLPAGGLFFLKV 84
Fly 85 VNSRR-ETDAGIYWCEAKNELGVARSRNATLQVAVLRDEFRLEPQNTRIAQGDTALLECAAPRGI 148
Fly 149 PEPTVTWKKGGQKL-DLEGSKRVRIVDGGNLAIQDARQTDEGQYQCIAKNPVGVRESSLATLKVH 212
Fly 213 VKPYIIRGPHDQTVLEGASVTFPCRVGGDPMPDVLWLRTASGGNMPLDRVSVLEDRSLRLERVTI 277
Fly 278 ADEGEYSCEADNVVGAITAMGTLTVYAPPKFIQRPASKSVELGADTSFECRAIGNPKPTIFWTIK 342
Fly 343 NNSTLIFP--GAPPLDRFHSLNTEEGHSILTLTRFQRTDKDLVILCNAMNEVASITSRVQLSLDS 405
Fly 406 QE-DRPPPIIISGPVNQTLPIKSLATLQCKAIGLPSPTISWYRDGIPVQ-PSSKLNITTSGDLII 468
Fly 469 SDLDRQQDQGLYTCVASSRAGKSTWSGFLR-----------IELPTNPNIKFYRAPEQTKCPSAP 522
Fly 523 GQPKILNATASALTIVWPTSDKAGASSFLGYSVEMYCTNQSRTWIPIASRLSEPIFTVESLTQGA 587
Fly 588 AYMFIVRAENSLGFSPPSPISEPITAGKLVGVRDGS-----ESTGTSQLLLSDVETLLQANDVVE 647
Fly 648 LLEANASDSTTARLSWDIDS-GQYIEGFYLYARELHSSEYKMVTLLNKGQGLSSCTVPGLAKAST 711
Fly 712 YEFFLVPFYKSIVGKPSNSRRMRTLEDVPEAPPYGME-AIQFNR-TSVFLKWLPPQPNRTRNGIL 774
Fly 775 TSYNVVVKGLDVHNTTRIFKNMTIDAAAPTLLLANLTTGVTYYIAVAAATRVGVGPFSKPAVLRI 839
Fly 840 DARTQSLDTGYTRYP--------ISRDIADDF---LTQTWFIVLLGSIIAIIVFLLG-ALVLFKR 892
Fly 893 YQFIKQTSLGSLHGN------------HAIGTVRKFPTL-----PLNGG----GAVGAGGSNSTA 936
Fly 937 AAGQSGHGLWIDPTSGVW--------RQAAGGGNPGGVGSCTTKEQLPG-----------YAQAT 982
Fly 983 AQQGQQPTLLPDYERLSPLNMPDYAEVACSTFKSPTHGAPPMGGGGGGQSASLYDSCGAYATTNV 1047
Fly 1048 VANVKLYQNRYATKPNQSSGSNNNNHQGNDYQSTG-------------MYSAPPSAHYGCLEPKQ 1099
Fly 1100 QQQQQQPNL------------MTTSTASTAIL-----------TNSPAKVKKINITENKMDQLEG 1141
Fly 1142 KSE--------------RTNPFNQQQQLLLASNALKQGLGA-----YANTTLAAQMASGGGAGTL 1187
Fly 1188 RRQRQPKTLYKSENNILGK-----SGLRQNTMNASVGAP-----SNGQMDFLTGGPPSEGGDFS- 1241
Fly 1242 GLGLCNSTNQLLNDWASSASI--AAPGDYHFGSKQPSKQH-------LYVKAKDGTWSAVSSDAY 1297
Fly 1298 QSFKHQQQHHPFLAGSGDNTKSLASVNSLAGDSKFLSSFGS 1338 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 51/97 (53%) |
I-set | 23..116 | CDD:254352 | 51/96 (53%) | ||
I-set | 122..211 | CDD:254352 | 40/89 (45%) | ||
Ig | 125..211 | CDD:299845 | 38/86 (44%) | ||
I-set | 215..302 | CDD:254352 | 36/86 (42%) | ||
Ig | 232..302 | CDD:299845 | 29/69 (42%) | ||
I-set | 306..401 | CDD:254352 | 28/96 (29%) | ||
Ig | 320..411 | CDD:299845 | 27/93 (29%) | ||
I-set | 412..492 | CDD:254352 | 32/80 (40%) | ||
IGc2 | 429..489 | CDD:197706 | 21/60 (35%) | ||
FN3 | 519..612 | CDD:238020 | 30/92 (33%) | ||
FN3 | 644..735 | CDD:238020 | 18/91 (20%) | ||
fn3 | 743..832 | CDD:278470 | 30/90 (33%) | ||
Robo3 | XP_038937330.1 | Ig strand A | 182..185 | CDD:409353 | 1/2 (50%) |
Ig strand A' | 187..191 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 195..202 | CDD:409353 | 3/6 (50%) | ||
Ig strand C | 210..215 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 217..220 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 226..230 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 232..238 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 245..253 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 256..267 | CDD:409353 | 6/10 (60%) | ||
Ig | 274..356 | CDD:416386 | 35/83 (42%) | ||
Ig strand A | 274..277 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 279..283 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 286..295 | CDD:409353 | 4/8 (50%) | ||
Ig strand C | 301..306 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 309..312 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 315..320 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 321..328 | CDD:409353 | 3/6 (50%) | ||
Ig strand F | 335..343 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 346..356 | CDD:409353 | 4/9 (44%) | ||
Ig | 361..458 | CDD:416386 | 28/101 (28%) | ||
Ig strand A | 361..365 | CDD:409353 | 1/3 (33%) | ||
Ig strand A' | 367..371 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 377..385 | CDD:409353 | 3/7 (43%) | ||
Ig strand C | 388..395 | CDD:409353 | 4/6 (67%) | ||
Ig strand C' | 397..400 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 413..418 | CDD:409353 | 2/6 (33%) | ||
Ig strand E | 420..427 | CDD:409353 | 3/8 (38%) | ||
Ig strand F | 433..442 | CDD:409353 | 2/9 (22%) | ||
Ig strand G | 444..455 | CDD:409353 | 3/10 (30%) | ||
Ig | 465..549 | CDD:416386 | 33/84 (39%) | ||
Ig strand A | 465..468 | CDD:409353 | 2/2 (100%) | ||
Ig strand A' | 472..475 | CDD:409353 | 2/2 (100%) | ||
Ig strand B | 481..488 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 494..499 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 501..503 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 510..514 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 517..522 | CDD:409353 | 2/4 (50%) | ||
Ig strand F | 530..538 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 541..549 | CDD:409353 | 3/7 (43%) | ||
FN3 | 569..662 | CDD:238020 | 31/99 (31%) | ||
FN3 | 693..773 | CDD:238020 | 16/79 (20%) | ||
FN3 | 783..876 | CDD:238020 | 32/97 (33%) | ||
Ig | 77..175 | CDD:416386 | 51/97 (53%) | ||
Ig strand A | 77..81 | CDD:409353 | 3/3 (100%) | ||
Ig strand A' | 84..89 | CDD:409353 | 1/4 (25%) | ||
Ig strand B | 93..101 | CDD:409353 | 5/7 (71%) | ||
Ig strand C | 107..112 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 115..117 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 128..131 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 134..140 | CDD:409353 | 4/5 (80%) | ||
Ig strand F | 152..160 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 163..175 | CDD:409353 | 7/11 (64%) | ||
Ig | 182..267 | CDD:416386 | 39/87 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 106 | 1.000 | Domainoid score | I6432 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D173520at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9043 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101537 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.820 |