Sequence 1: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006510170.1 | Gene: | Robo3 / 19649 | MGIID: | 1343102 | Length: | 1403 | Species: | Mus musculus |
Alignment Length: | 1452 | Identity: | 407/1452 - (28%) |
---|---|---|---|
Similarity: | 618/1452 - (42%) | Gaps: | 276/1452 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 PRIVEHPIDTTVPRHEPATLNCKAEGSPTPTIQWYKDGVPLKIL---PGSHRITLPAGGLFFLKV 84
Fly 85 VNSRR-ETDAGIYWCEAKNELGVARSRNATLQVAVLRDEFRLEPQNTRIAQGDTALLECAAPRGI 148
Fly 149 PEPTVTWKKGGQKL-DLEGSKRVRIVDGGNLAIQDARQTDEGQYQCIAKNPVGVRESSLATLKVH 212
Fly 213 VKPYIIRGPHDQTVLEGASVTFPCRVGGDPMPDVLWLRTASGGNMPLDRVSVLEDRSLRLERVTI 277
Fly 278 ADEGEYSCEADNVVGAITAMGTLTVYAPPKFIQRPASKSVELGADTSFECRAIGNPKPTIFWTIK 342
Fly 343 NNSTLIFP--GAPPLDRFHSLNTEEGHSILTLTRFQRTDKDLVILCNAMNEVASITSRVQLSLDS 405
Fly 406 QE-DRPPPIIISGPVNQTLPIKSLATLQCKAIGLPSPTISWYRDGIPVQ-PSSKLNITTSGDLII 468
Fly 469 SDLDRQQDQGLYTCVASSRAGKSTWSGFLRIEL-----------PTNPNIKFYRAPEQTKCPSAP 522
Fly 523 GQPKILNATASALTIVWPTSDKAGASSFLGYSVEMYCTNQSRTWIPIASRLSEPIFTVESLTQGA 587
Fly 588 AYMFIVRAENSLGFSPPSPISEPITAGKLVGVRDGSESTGTSQLLLSDVETLLQANDVVELLEAN 652
Fly 653 ASDSTTARLSWDIDSG-QYIEGFYLYAR--ELHSSEYKMVTLLNKGQGLSSCTVPGLAKASTYEF 714
Fly 715 FLVPFYKSIVGKPSNSRRMRTLEDVPEAPPYGME-AIQFNR-TSVFLKWLPPQPNRTRNGILTSY 777
Fly 778 NVVVKGLDVHNTTRIFKNMTIDAAAPTLLLANLTTGVTYYIAVAAATRVGVGPFSKPAVLRIDAR 842
Fly 843 TQSLDTGYTRYP--------ISRDIAD---DFLTQTWFIVLLGSIIAIIVFLLG-ALVLFKRYQF 895
Fly 896 IKQTSLGSLHGNHAIGTVRKFPTLPLNGGGAVGAGGSNSTAAAGQSGHGLWIDPTSGVWRQAAGG 960
Fly 961 GNPGGV------GSCTTKEQLPG-----------YAQATAQQGQQPTLLPDYERLSPLNMPDYAE 1008
Fly 1009 VACSTFKSPTHGAPPMGGGGGGQSASLYDSCGAYATTNVVANVKLYQNRYATKPNQSSGSNNNNH 1073
Fly 1074 QGNDYQSTG-------------MYSAPPSAHYGCLEPKQQQQQ-------------QQPNLMTTS 1112
Fly 1113 TA----------------------STAILTNSPAKVKKINITENKMDQLEGKSER-----TNPFN 1150
Fly 1151 QQQQLLLASNALKQGLGA------YANTTLAAQMASGGGAGT---------------LRRQRQPK 1194
Fly 1195 TL-YKSENNILGKSGLRQNTMNASVGAPSNGQMDFLTGGPPSEGGDFS-GLGLCNSTNQLLNDWA 1257
Fly 1258 SSASI--AAP-GDYHFGSKQ---PSKQHLYVKAKDGTWSAVSSDAYQSFKHQQQHHPFLAGSGDN 1316
Fly 1317 TKSLASVNSLAGDSKFLSSFGS 1338 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 51/97 (53%) |
I-set | 23..116 | CDD:254352 | 51/96 (53%) | ||
I-set | 122..211 | CDD:254352 | 40/89 (45%) | ||
Ig | 125..211 | CDD:299845 | 38/86 (44%) | ||
I-set | 215..302 | CDD:254352 | 35/86 (41%) | ||
Ig | 232..302 | CDD:299845 | 28/69 (41%) | ||
I-set | 306..401 | CDD:254352 | 30/96 (31%) | ||
Ig | 320..411 | CDD:299845 | 28/93 (30%) | ||
I-set | 412..492 | CDD:254352 | 33/80 (41%) | ||
IGc2 | 429..489 | CDD:197706 | 22/60 (37%) | ||
FN3 | 519..612 | CDD:238020 | 30/92 (33%) | ||
FN3 | 644..735 | CDD:238020 | 18/93 (19%) | ||
fn3 | 743..832 | CDD:278470 | 32/90 (36%) | ||
Robo3 | XP_006510170.1 | Ig | 64..162 | CDD:386229 | 51/97 (53%) |
Ig | 170..254 | CDD:386229 | 38/86 (44%) | ||
Ig | 275..343 | CDD:386229 | 28/69 (41%) | ||
Ig4_Robo | 361..450 | CDD:143203 | 28/93 (30%) | ||
Ig | 451..531 | CDD:386229 | 33/80 (41%) | ||
FN3 | 564..649 | CDD:238020 | 26/85 (31%) | ||
FN3 | 678..761 | CDD:238020 | 17/84 (20%) | ||
FN3 | 771..864 | CDD:238020 | 34/97 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 104 | 1.000 | Domainoid score | I6680 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4222 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8796 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101537 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
9 | 8.670 |