Sequence 1: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001292144.1 | Gene: | Robo4 / 100911068 | RGDID: | 727947 | Length: | 1021 | Species: | Rattus norvegicus |
Alignment Length: | 777 | Identity: | 192/777 - (24%) |
---|---|---|---|
Similarity: | 291/777 - (37%) | Gaps: | 191/777 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 PPRIVEHPIDTTVPRHEPATLNCKAEGSPTPTIQWYKDGVPLKI-LPGSHRITLPAGGLFFLKVV 85
Fly 86 NSRRETD-------AGIYWCEAKNELGVARSRNATLQVAVLRDEFRLEPQNTRIAQGDTALLECA 143
Fly 144 APRGIPEPTVTWKKGGQKLDLEGSKRVRIVDGGNLAIQDARQTDEGQYQCIAKNPVGVRESSLAT 208
Fly 209 LKVHVKPYIIRGPHDQTV--------LEGASVTFPCRVGGDPMPDVLWLR-TASGGNMPLDRVSV 264
Fly 265 LEDRSLRLERVTIADEGEYSCEA--DNVVGAITAMGTL--------------------------- 300
Fly 301 -----TVYAPPKFIQ-RPASKSVEL-----------GADTSFECRAIGNPK-PTIFWTIKNNSTL 347
Fly 348 I-----FPGAPPLDRFHSLNTEEGHSILTLTRFQRTDKDLVILCNAMNEVASITSR-VQLSLDSQ 406
Fly 407 ED--RPPPIIISGPVNQTLPIKSLATLQCKAIGLPSPTISWYR---DGIPVQPSSKLNITTSGDL 466
Fly 467 IISD-LDRQQDQGL--------------YTCVASSRAG--------------------------- 489
Fly 490 -KSTWSGFLRIELPTNPNIKFYRAPEQTKCPSAPGQPKILNATASALTIVWPTSDKAGASSFLGY 553
Fly 554 SVEMYCTNQSRTWIPIASRLSEPIFTVES--LTQGAAYMFI------VRAENSLGFSPP----SP 606
Fly 607 ISEP--ITAGKLVGV---RDGSESTG----TSQLLLSDVETLLQANDVVELLEANASDSTTA 659 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 37/102 (36%) |
I-set | 23..116 | CDD:254352 | 36/100 (36%) | ||
I-set | 122..211 | CDD:254352 | 35/88 (40%) | ||
Ig | 125..211 | CDD:299845 | 33/85 (39%) | ||
I-set | 215..302 | CDD:254352 | 22/129 (17%) | ||
Ig | 232..302 | CDD:299845 | 18/104 (17%) | ||
I-set | 306..401 | CDD:254352 | 21/113 (19%) | ||
Ig | 320..411 | CDD:299845 | 17/99 (17%) | ||
I-set | 412..492 | CDD:254352 | 21/125 (17%) | ||
IGc2 | 429..489 | CDD:197706 | 15/77 (19%) | ||
FN3 | 519..612 | CDD:238020 | 25/106 (24%) | ||
FN3 | 644..735 | CDD:238020 | 7/16 (44%) | ||
fn3 | 743..832 | CDD:278470 | |||
Robo4 | NP_001292144.1 | Ig | 41..144 | CDD:299845 | 37/102 (36%) |
I-set | 42..143 | CDD:254352 | 36/100 (36%) | ||
I-set | 150..231 | CDD:254352 | 34/82 (41%) | ||
Ig | 152..236 | CDD:299845 | 33/85 (39%) | ||
fn3 | 275..346 | CDD:278470 | 15/77 (19%) | ||
fn3 | 361..443 | CDD:278470 | 16/81 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 544..563 | 4/18 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 600..634 | 13/44 (30%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 726..810 | 10/40 (25%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 81 | 1.000 | Domainoid score | I8282 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4222 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
3 | 2.860 |