Sequence 1: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031752453.1 | Gene: | robo2 / 100493913 | XenbaseID: | XB-GENE-980527 | Length: | 1620 | Species: | Xenopus tropicalis |
Alignment Length: | 1540 | Identity: | 442/1540 - (28%) |
---|---|---|---|
Similarity: | 669/1540 - (43%) | Gaps: | 320/1540 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 FVFIVFLL-------KWTHAQGSH------------PPRIVEHPIDTTVPRHEPATLNCKAEGSP 50
Fly 51 TPTIQWYKDGVPL---KILPGSHRITLPAGGLFFLKVVNSRR-ETDAGIYWCEAKNELGVARSRN 111
Fly 112 ATLQVAVLRDEFRLEPQNTRIAQGDTALLECAAPRGIPEPTVTWKKGGQKLDLEGSKRVRI-VDG 175
Fly 176 GNLAIQDARQTDEGQYQCIAKNPVGVRESSLATLKVHVKPYIIRGPHDQTVLEGASVTFPCRVGG 240
Fly 241 DPMPDVLWLRTASGGNMPLDRVSVLEDRSLRLERVTIADEGEYSCEADNVVGAITAMGTLTV--- 302
Fly 303 -YAPPKFIQRPASKSVELGADTSFECRAIGNPKPTIFWTIKNNSTLIFPGAP--PLDRFHSLNTE 364
Fly 365 EGHSILTLTRFQRTDKDLVILCNAMNEVASITSRVQLSL-DSQEDRPPPIIISGPVNQTLPIKSL 428
Fly 429 ATLQCKAIGLPSPTISWYRDGIP--VQPSSKLNITTSGDLIISDLDRQQDQGLYTCVASSRAGKS 491
Fly 492 TWSGFLRIELPTNPNI-KFYRAPEQTKCPSAPGQPKILNATASALTIVW-PTSDKAGASSFLGYS 554
Fly 555 VEMYCTNQSRTWIPIASRLSEPIFTVESLTQGAAYMFIVRAENSLGFSPPSPISEPITAGKLVGV 619
Fly 620 RDGSESTGTSQLLLSDVETLLQANDVVELLEANASDSTTARLSWDID-SGQYIEGFYLYARELHS 683
Fly 684 SEYKMV--TLLNKGQGLSSCTVPGLAKASTYEFFLVPFYKSIVGKPSNSRRMRTLEDVPEAPPYG 746
Fly 747 MEAIQF---NRTSVFLKWLPPQPNRTRNGILTSYNVVVKGLDVHNTTRIFKNMTIDAAAPTLLLA 808
Fly 809 NLTTGVTYYIAVAAATRVGVGPFSKPAVLRIDARTQSLDTGYTRYPISRDIADDFLTQTWFIVLL 873
Fly 874 GSIIAIIVFLLG-ALVLFKRYQFIKQTSLG-----------------SLHGNHAIGTVR------ 914
Fly 915 ----------------------------------------------------------KFPTLPL 921
Fly 922 NG--------GGAVGAGGSNSTAAA----GQ----------------SGHGLWIDPTSGVWRQAA 958
Fly 959 GGGNPGGVGSCTTKEQLPGYAQATAQQGQQPTLL---PDYERLSPLN--MPDYAEVACSTFKSPT 1018
Fly 1019 HGAPPMGGG-GGGQSASLYDSCGAYATTNVVANVKLYQNRYATKPNQSSGSNNNN---------- 1072
Fly 1073 -------HQGNDYQSTGMYS---APP-----SAHYGCLEPKQQQQQQQPNLMTTSTA-------- 1114
Fly 1115 --STAILTNSPAKVKKINITENKMDQLEGKSERTNPFNQQQQLLLASNALKQGLGAYANT--TLA 1175
Fly 1176 AQMASGGGAGTLRRQRQPKTLYKSENNILGKSGLRQNTMNASVGAPSNGQMDFLTGGPPSEGGDF 1240
Fly 1241 SGLGLCNSTNQLLNDWASSASIAAPGDYHFGSKQPSKQHLYVKAKDGTWSAVSSDAYQSFKHQQQ 1305
Fly 1306 HHPFLAGSGD--------NTKSLA-SVNSLAGDSKFLSSFGSSAN 1341 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 56/98 (57%) |
I-set | 23..116 | CDD:254352 | 55/96 (57%) | ||
I-set | 122..211 | CDD:254352 | 39/89 (44%) | ||
Ig | 125..211 | CDD:299845 | 37/86 (43%) | ||
I-set | 215..302 | CDD:254352 | 33/86 (38%) | ||
Ig | 232..302 | CDD:299845 | 26/69 (38%) | ||
I-set | 306..401 | CDD:254352 | 33/96 (34%) | ||
Ig | 320..411 | CDD:299845 | 33/93 (35%) | ||
I-set | 412..492 | CDD:254352 | 35/81 (43%) | ||
IGc2 | 429..489 | CDD:197706 | 25/61 (41%) | ||
FN3 | 519..612 | CDD:238020 | 30/93 (32%) | ||
FN3 | 644..735 | CDD:238020 | 22/93 (24%) | ||
fn3 | 743..832 | CDD:278470 | 31/91 (34%) | ||
robo2 | XP_031752453.1 | IgC_1_Robo | 56..154 | CDD:409490 | 55/97 (57%) |
Ig strand B | 73..77 | CDD:409490 | 2/3 (67%) | ||
Ig strand C | 86..90 | CDD:409490 | 2/3 (67%) | ||
Ig strand E | 113..117 | CDD:409490 | 2/3 (67%) | ||
Ig strand F | 132..137 | CDD:409490 | 2/4 (50%) | ||
Ig strand G | 146..149 | CDD:409490 | 2/2 (100%) | ||
Ig | 161..246 | CDD:416386 | 38/87 (44%) | ||
Ig strand A | 161..164 | CDD:409353 | 2/2 (100%) | ||
Ig strand A' | 166..170 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 174..181 | CDD:409353 | 4/6 (67%) | ||
Ig strand C | 189..194 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 196..199 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 205..209 | CDD:409353 | 2/3 (67%) | ||
Ig strand E | 211..217 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 224..232 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 235..246 | CDD:409353 | 5/10 (50%) | ||
Ig | 253..335 | CDD:416386 | 32/83 (39%) | ||
Ig strand A | 253..256 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 258..262 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 265..274 | CDD:409353 | 3/8 (38%) | ||
Ig strand C | 280..285 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 288..291 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 294..299 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 300..307 | CDD:409353 | 3/6 (50%) | ||
Ig strand F | 314..322 | CDD:409353 | 2/7 (29%) | ||
Ig strand G | 325..335 | CDD:409353 | 5/9 (56%) | ||
IgI_4_Robo | 344..441 | CDD:409391 | 35/101 (35%) | ||
Ig strand B | 360..364 | CDD:409391 | 1/3 (33%) | ||
Ig strand C | 373..377 | CDD:409391 | 1/3 (33%) | ||
Ig strand E | 403..407 | CDD:409391 | 1/7 (14%) | ||
Ig strand F | 417..422 | CDD:409391 | 2/5 (40%) | ||
Ig strand G | 430..433 | CDD:409391 | 0/2 (0%) | ||
IgI_5_Robo | 448..535 | CDD:409544 | 38/87 (44%) | ||
Ig strand B | 464..468 | CDD:409544 | 2/3 (67%) | ||
Ig strand C | 477..481 | CDD:409544 | 2/3 (67%) | ||
Ig strand E | 501..505 | CDD:409544 | 2/3 (67%) | ||
Ig strand F | 515..520 | CDD:409544 | 3/4 (75%) | ||
Ig strand G | 528..531 | CDD:409544 | 2/2 (100%) | ||
FN3 | 553..646 | CDD:238020 | 30/94 (32%) | ||
FN3 | 677..762 | CDD:238020 | 20/84 (24%) | ||
FN3 | 771..863 | CDD:238020 | 32/96 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 103 | 1.000 | Domainoid score | I6691 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9461 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.000 |