Sequence 1: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937566.3 | Gene: | robo4 / 100493397 | XenbaseID: | XB-GENE-955396 | Length: | 1166 | Species: | Xenopus tropicalis |
Alignment Length: | 1498 | Identity: | 292/1498 - (19%) |
---|---|---|---|
Similarity: | 460/1498 - (30%) | Gaps: | 586/1498 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 VFIVFLLKW----------------------THAQGSH----------------------PPRIV 26
Fly 27 EHPIDTTVPRHEPATLNCKAEGSPTPTIQWYKDGVPLKILPGSHR----ITLPAGGLFFLKVVNS 87
Fly 88 RRETDAGIYWCEAKNELGVARSRNATLQVAVLRDEFRLEPQNTRIAQGDTALLECAAPRGIPEPT 152
Fly 153 VTWKKGGQKLDLEGSKRVRIVDGGNLAIQDARQTDEGQYQCIAKNPVGVRESSLATLKVHVKPYI 217
Fly 218 IRGPHDQTVLEGASVTFPCRVGGDPMPDVLWLRTASGGNMPLDRVSVLEDRSLRLERVTIADEGE 282
Fly 283 YSCEADNVVGAITAMGTLTVYAPPKFIQRPASKSVELGADTSFECRAIGNPKPTIFWTIKNNSTL 347
Fly 348 IFPGAPPLDRFHSLNTEEGHSILTLTRFQRTDKDLVILCNAMNEVASITSRVQLSLDSQEDRPPP 412
Fly 413 IIISGPVNQTLPIKSLATLQCKAIGLPSPTISWYRDGIPVQPSSKLNITTSGDLIISDLDRQQDQ 477
Fly 478 GLYTCVASSRAGKSTWSGFLRIELPTNPNIKFYRAPEQTKCPSAPGQPKILNATASALTIVWPTS 542
Fly 543 DKAGASSFLGYSVEMYCTNQSRTWIPIASRLSEPIFTVESLTQGAAYMFIVRAENSLGFSPPSPI 607
Fly 608 SEPITAGKLVGVRDGSESTGTSQLLLSDVETLLQANDVVELLEANASDSTTARLSWDI-DSGQYI 671
Fly 672 EGFYLYARELHSSEYKMVTLLNKGQGLSSCTVPGLAKASTYEFFLVPFYKSIVGKPSNSRRMRTL 736
Fly 737 EDVPEAPPYGME--AIQFNRTSVFLKWLPPQPNRTRNGILTSYNVVVKGLDV---HNTTRIFKNM 796
Fly 797 TIDAAAPTLLLANLTTGVTYYIAVAAATRVGVGPFSKPAVLRIDARTQSLDTGYTRYPISRDIAD 861
Fly 862 DFLTQTWFIVLL---------GSI--IAIIVFLLGALVLFKRYQFIKQTSLGSLHGNHAIGTVRK 915
Fly 916 FPTLPLNGGGAVGAGGSNSTAAAGQSGHGL------WIDPTSGVWRQAAGGGNPGGVGSCTT--- 971
Fly 972 -----------KEQLPGYAQATAQQGQQPTLLPDYERLSPLNMPDYAEVACSTFKSPTHGAPPMG 1025
Fly 1026 GGGGGQSASLYDSCGAYATTNVVANVKLYQNRYATKPNQSSGSNN---------------NNHQG 1075
Fly 1076 NDYQST----------GMYSAPPSAHYGCLEPKQ-----------------------QQQQQQPN 1107
Fly 1108 LMTTSTA--------STAILTNSPAKVKKINITENKMDQLEGKSERTNPFNQQQQLLLASNALKQ 1164
Fly 1165 GLGAYANTTLAAQM--ASGGGAGTLRRQRQPKTLYKSENNILGKSGLRQNTMNASVGAPSNGQM- 1226
Fly 1227 -DFLTGGPPSEGG--------DFSGLG-------LCNSTNQLLNDWASSASIAAPGDYHFGSKQP 1275
Fly 1276 SKQHLYVKAKDGTWSAVSSDAYQSFKHQQQHHPFLAGSGDNT----KSLASVNSLAGDSKFLSSF 1336
Fly 1337 GSS 1339 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 45/98 (46%) |
I-set | 23..116 | CDD:254352 | 44/96 (46%) | ||
I-set | 122..211 | CDD:254352 | 37/88 (42%) | ||
Ig | 125..211 | CDD:299845 | 35/85 (41%) | ||
I-set | 215..302 | CDD:254352 | 28/86 (33%) | ||
Ig | 232..302 | CDD:299845 | 23/69 (33%) | ||
I-set | 306..401 | CDD:254352 | 3/94 (3%) | ||
Ig | 320..411 | CDD:299845 | 3/90 (3%) | ||
I-set | 412..492 | CDD:254352 | 3/79 (4%) | ||
IGc2 | 429..489 | CDD:197706 | 2/59 (3%) | ||
FN3 | 519..612 | CDD:238020 | 0/92 (0%) | ||
FN3 | 644..735 | CDD:238020 | 22/91 (24%) | ||
fn3 | 743..832 | CDD:278470 | 23/93 (25%) | ||
robo4 | XP_002937566.3 | Ig | 70..168 | CDD:416386 | 44/97 (45%) |
Ig strand A | 70..74 | CDD:409353 | 3/3 (100%) | ||
Ig strand A' | 77..82 | CDD:409353 | 1/4 (25%) | ||
Ig strand B | 86..94 | CDD:409353 | 5/7 (71%) | ||
Ig strand C | 100..105 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 108..110 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 121..125 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 128..134 | CDD:409353 | 4/5 (80%) | ||
Ig strand F | 145..153 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 156..168 | CDD:409353 | 7/11 (64%) | ||
Ig | 175..260 | CDD:416386 | 36/86 (42%) | ||
Ig strand A | 175..178 | CDD:409353 | 2/2 (100%) | ||
Ig strand A' | 180..184 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 188..195 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 203..208 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 210..213 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 219..222 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 225..231 | CDD:409353 | 3/5 (60%) | ||
Ig strand F | 238..246 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 249..260 | CDD:409353 | 5/10 (50%) | ||
Ig | 269..349 | CDD:416386 | 27/81 (33%) | ||
Ig strand A' | 272..276 | CDD:409353 | 2/3 (67%) | ||
Ig strand B | 279..288 | CDD:409353 | 3/8 (38%) | ||
Ig strand C | 294..299 | CDD:409353 | 1/6 (17%) | ||
Ig strand C' | 302..305 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 308..313 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 314..321 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 328..336 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 339..349 | CDD:409353 | 2/9 (22%) | ||
FN3 | 377..462 | CDD:238020 | 20/84 (24%) | ||
fn3 | 471..557 | CDD:394996 | 23/93 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 82 | 1.000 | Domainoid score | I8278 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |