DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42329 and ndg-4

DIOPT Version :9

Sequence 1:NP_608590.2 Gene:CG42329 / 33312 FlyBaseID:FBgn0259229 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001022618.1 Gene:ndg-4 / 175582 WormBaseID:WBGene00003577 Length:687 Species:Caenorhabditis elegans


Alignment Length:710 Identity:156/710 - (21%)
Similarity:265/710 - (37%) Gaps:214/710 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QTYSSKDLLTWMQSSNFGYQVLQQALNDNQSSSAAEASCLAEVRLLLTGAEAKSLPALRVFDAWG 82
            |:.::|.|....|.|...||                              :|.:...|:.||:.|
 Worm    87 QSIANKSLSEQEQCSKCAYQ------------------------------KANNGWVLKWFDSLG 121

  Fly    83 KFPQGLLYGHFMDMGNYESCLSLDLSKSLGNVMTINAGAKYCLSRMQFESLLMEAA--GADALTL 145
            |...|:..|::..:|:||.|.:|....|.        ..:||...|:.....:|:.  ..|.|::
 Worm   122 KPAAGITDGNYYWLGDYELCAALASDGSF--------DGQYCRIEMEVPDAGVESGCPQTDPLSI 178

  Fly   146 SIGTCIPSSCSAAQL----SRWMSGHLKDMFGQNSTEATLVQEKDCSLAHRDPMNGLDWLAVSIL 206
            .:|.|.||:||.|.|    |.::..:||               .:|...:|       |..|::|
 Worm   179 ILGVCFPSACSVADLTTVSSIYLPYNLK---------------VECESQNR-------WSFVTVL 221

  Fly   207 ILLCIVVLLA--TILDYSCVSN-KLLSSFSLRKNVPQLLKT-SNTPSPRVIPCLNGIRCLTIIWI 267
            :|:.::|.:.  .:..:...|| .:||.||:..|..:...| ..:|:..|:   :|:..|....|
 Worm   222 LLIILMVWIVPQAVATFQTSSNDSILSCFSIPDNAKRTFSTRRESPNLHVV---HGLEFLLFFTI 283

  Fly   268 ILGHGYMYLLLAPTIN--AYDIVAWAQMPFSMILQSGTTSVD---------TFFLLSGLLLVLSA 321
            :.|..|.::|  |.|.  |:.....:..|.. |:.:.:..:|         |.:||.|.:|.|.:
 Worm   284 VSGMVYNFML--PYIENVAFAFEGVSSFPMH-IVNNYSYQIDGLLALSAFYTTYLLFGNILTLRS 345

  Fly   322 LREMDRSKGRLHVPLMYLHRLVRLTPVLALAVLIFMTLFPRLDSGPLWNQFTSSSELCSDTWWAT 386
            ..:            ..|.||.|..|...:.||....:||.:.|||:|.. |.:...|...||..
 Worm   346 AFD------------YILMRLFRFWPAYIVCVLFMYVIFPGVSSGPMWIH-TDTVNRCGSGWWKN 397

  Fly   387 LLYVQNYAAPGRMCLGHSWYLAVDMQLYIISPLLLIALYKWGKKAIAGIVLLILLLSGCVFG--- 448
            :|::.|:......|:...:.::::.|.|.|   |:..::...|     ..||..|.:..|||   
 Worm   398 ILFINNWFNVTDTCVDIGYVISMEAQYYAI---LIFVIFLSSK-----YPLLTQLFAYTVFGSSI 454

  Fly   449 ----------------------IVMLRDLKVFDRYGNLGGDSTEMRLIYYTTHARATPWLIGLLF 491
                                  :.:.:...|||:             :..:..||::.:.:|.:|
 Worm   455 IFSFVRAYSQELPPAPMLTLEPVPLTKVYAVFDQ-------------LLLSLFARSSNYCLGFIF 506

  Fly   492 G----------------YFLHHQNVRKTRLPKWLALVLWILSLSMLATVIFAVYPYTQSGAGDIS 540
            |                |.:|          |.||::          .:.|||.|:.  ||...|
 Worm   507 GIGCATASDELRESGLSYCMH----------KLLAII----------CIAFAVVPFV--GAFPYS 549

  Fly   541 AMA--------GAFYLCCSRIAWPLALCWIIWACQNGL--APIVNEFLSWSFWQPLSKLSY---- 591
            |.|        .|.|....|..|..||...::.|.:|.  ...:|..|.|..:.||||:::    
 Worm   550 AYAWVSNFEIMNASYAALHRPMWSFALLSFVYLCHHGAFSKEWLNALLEWRVFAPLSKVTWIALV 614

  Fly   592 -----CLYIWHLLVETVHIARIKTSLHFSD-YDAILRFWSDFGITLFVSMFMHLCVEVPL 645
                 .||.:..|.:..:      :.|:|. |.||    |...:..||:||:.:.|..|:
 Worm   615 VAEPIILYFFSSLNKPAY------ATHWSTMYTAI----STALLAYFVAMFLDIFVTRPI 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42329NP_608590.2 NRF 71..179 CDD:214781 30/113 (27%)
OafA 253..648 CDD:224748 101/465 (22%)
Acyl_transf_3 253..639 CDD:280013 99/457 (22%)
ndg-4NP_001022618.1 NRF 110..215 CDD:214781 32/134 (24%)
OafA 325..668 CDD:224748 89/406 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1171418at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11161
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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