DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5001 and CG5504

DIOPT Version :10

Sequence 1:NP_608586.2 Gene:CG5001 / 33308 FlyBaseID:FBgn0031322 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster


Alignment Length:396 Identity:107/396 - (27%)
Similarity:161/396 - (40%) Gaps:114/396 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVY 64
            :.||||..||:.|.|...:|||||.:||.:||||.||. .:|..||:||:||||||||:.||..|
  Fly    62 LAKDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRREY 126

  Fly    65 DKYGE---------DGLKSGGTRNGGPSSNSFTYQFHG--DPRATFAQFFGNSNPFA--SFFDMG 116
            |.||:         .|...||....||...|.::||..  ||...|.:.||..| |.  ||.|..
  Fly   127 DTYGQTAENIGRQGGGFPGGGAGGFGPEGFSQSWQFRSSIDPEELFRKIFGEGN-FRTNSFDDFA 190

  Fly   117 DNLF-----DKKVFDLDTEPDFFSSPFGGI----------------------GSRHGL-----GS 149
            |:.|     .:.|.||.     |:....|:                      |::.|.     |:
  Fly   191 DSKFGFGQAQEMVMDLT-----FAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGRCQYCNGT 250

  Fly   150 GFRPSFRSHSFNVHTPFKKEQKQDPPVEHDLYVTLEEIYHGCVKKMKISRRIVQADGSSRK-EEK 213
            ||. :..:..|.:.:..:..|.           |.:.|.:.|          .:.:|..|. :.:
  Fly   251 GFE-TVSTGPFVMRSTCRYCQG-----------TRQHIKYPC----------SECEGKGRTVQRR 293

  Fly   214 FLAISIKPGWKSGTKVTFQKEGDQAPGKIPADIVFI-IRDKPHAMFKREGSDLRYTARLTLKQAL 277
            .:.:.:..|.::|..|..|         :.:..:|: .|.:....|:|||:|:...|.::|.||:
  Fly   294 KVTVPVPAGIENGQTVRMQ---------VGSKELFVTFRVERSDYFRREGADVHTDAAISLAQAV 349

  Fly   278 CGVVFQVPTMSGDKLRISTMQEI-IKPNT------------VKRIQGYGLPFPKDTTRKGDLLVA 329
            .|...:|..:..|       |.| ::|.|            :||:..:|         .||..|.
  Fly   350 LGGTVRVQGVYED-------QWINVEPGTSSHHKIMLRGKGLKRVNAHG---------HGDHYVH 398

  Fly   330 FDIQFP 335
            ..|..|
  Fly   399 VKITVP 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5001NP_608586.2 DnaJ_bact 4..347 CDD:274090 106/393 (27%)
CG5504NP_995932.1 djlA <9..117 CDD:236512 30/54 (56%)
DnaJ_bact 65..424 CDD:274090 106/393 (27%)

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