DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5001 and CG5504

DIOPT Version :9

Sequence 1:NP_001245832.1 Gene:CG5001 / 33308 FlyBaseID:FBgn0031322 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster


Alignment Length:396 Identity:107/396 - (27%)
Similarity:161/396 - (40%) Gaps:114/396 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVY 64
            :.||||..||:.|.|...:|||||.:||.:||||.||. .:|..||:||:||||||||:.||..|
  Fly    62 LAKDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRREY 126

  Fly    65 DKYGE---------DGLKSGGTRNGGPSSNSFTYQFHG--DPRATFAQFFGNSNPFA--SFFDMG 116
            |.||:         .|...||....||...|.::||..  ||...|.:.||..| |.  ||.|..
  Fly   127 DTYGQTAENIGRQGGGFPGGGAGGFGPEGFSQSWQFRSSIDPEELFRKIFGEGN-FRTNSFDDFA 190

  Fly   117 DNLF-----DKKVFDLDTEPDFFSSPFGGI----------------------GSRHGL-----GS 149
            |:.|     .:.|.||.     |:....|:                      |::.|.     |:
  Fly   191 DSKFGFGQAQEMVMDLT-----FAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGRCQYCNGT 250

  Fly   150 GFRPSFRSHSFNVHTPFKKEQKQDPPVEHDLYVTLEEIYHGCVKKMKISRRIVQADGSSRK-EEK 213
            ||. :..:..|.:.:..:..|.           |.:.|.:.|          .:.:|..|. :.:
  Fly   251 GFE-TVSTGPFVMRSTCRYCQG-----------TRQHIKYPC----------SECEGKGRTVQRR 293

  Fly   214 FLAISIKPGWKSGTKVTFQKEGDQAPGKIPADIVFI-IRDKPHAMFKREGSDLRYTARLTLKQAL 277
            .:.:.:..|.::|..|..|         :.:..:|: .|.:....|:|||:|:...|.::|.||:
  Fly   294 KVTVPVPAGIENGQTVRMQ---------VGSKELFVTFRVERSDYFRREGADVHTDAAISLAQAV 349

  Fly   278 CGVVFQVPTMSGDKLRISTMQEI-IKPNT------------VKRIQGYGLPFPKDTTRKGDLLVA 329
            .|...:|..:..|       |.| ::|.|            :||:..:|         .||..|.
  Fly   350 LGGTVRVQGVYED-------QWINVEPGTSSHHKIMLRGKGLKRVNAHG---------HGDHYVH 398

  Fly   330 FDIQFP 335
            ..|..|
  Fly   399 VKITVP 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5001NP_001245832.1 DnaJ 1..347 CDD:223560 107/396 (27%)
DnaJ 4..65 CDD:278647 35/61 (57%)
DnaJ_C 174..338 CDD:199909 35/177 (20%)
CG5504NP_995932.1 DnaJ 63..437 CDD:223560 107/395 (27%)
DnaJ 65..127 CDD:278647 35/61 (57%)
DnaJ_zf 227..287 CDD:199908 11/81 (14%)
DnaJ_C 288..409 CDD:199909 31/142 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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