DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tgt and tgt

DIOPT Version :10

Sequence 1:NP_608585.1 Gene:Tgt / 33307 FlyBaseID:FBgn0031321 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_414940.1 Gene:tgt / 949130 ECOCYCID:EG10996 Length:375 Species:Escherichia coli


Alignment Length:360 Identity:161/360 - (44%)
Similarity:215/360 - (59%) Gaps:2/360 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KARAGLMTLRHSEVNTPVFMPVGTQGTLKGIVPDQLIELNCQILLGNTYHLGLRPGIETLKKAGG 85
            :||.|.:......|.||.||||||.||:||:.|:::.....||:||||:||.||||.|.:|..|.
E. coli    11 RARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFHLWLRPGQEIMKLHGD 75

  Fly    86 LHKFMGWPRAILTDSGGFQMVSLLQLAEIDEHGVNFRSPFDNSQCMLTPEHSIEIQNAIGGDIMM 150
            ||.||.|...|||||||||:.||..:.:|.|.||:||:|.:.....|.||.|:|||..:|.||:|
E. coli    76 LHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVM 140

  Fly   151 QLDDVVKTTTTGPRVEEAMERTIRWVDRCIEA-HARDDDQSLFPIVQGGLDVPLRQRCVSALMER 214
            ..|:...........:.:||.::||..|..|. .:..:..:||.|:||.:...||...|..|::.
E. coli   141 IFDECTPYPADWDYAKRSMEMSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDI 205

  Fly   215 QVRGFAVGGLSGGESKHDFWRMVDVCTGYLPKDKPRYLMGVGFAADLVVCVALGIDMFDCVFPTR 279
            ...|:|||||:.||.|.|..|:::.....:|.||||||||||...|||..|..||||||||.|||
E. coli   206 GFDGYAVGGLAVGEPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTR 270

  Fly   280 TARFGCALVDSGQLNLKQPKYKLDMEPIDKDCDCSTCRRYTRSYLHHI-ATNESVSSSLLSIHNV 343
            .||.|...|..|.:.::..|||.|..|:|.:|||.|||.|:|:||||: ..||.:.:.|.:|||:
E. coli   271 NARNGHLFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNL 335

  Fly   344 AYQLRLMRSMREAIQRDEFPQFVADFMARHFKAEP 378
            .|..|||..:|:||:..:...||.||..|..:..|
E. coli   336 RYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVP 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TgtNP_608585.1 TGT 20..375 CDD:460299 160/355 (45%)
tgtNP_414940.1 Tgt 1..368 CDD:440112 160/356 (45%)

Return to query results.
Submit another query.