DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tgt and QTRT1

DIOPT Version :10

Sequence 1:NP_608585.1 Gene:Tgt / 33307 FlyBaseID:FBgn0031321 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_112486.1 Gene:QTRT1 / 81890 HGNCID:23797 Length:403 Species:Homo sapiens


Alignment Length:390 Identity:230/390 - (58%)
Similarity:293/390 - (75%) Gaps:4/390 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PLTYKVVAECSVSKARAGLMTLRHSEVNTPVFMPVGTQGTLKGIVPDQLIELNCQILLGNTYHLG 72
            |...::|||||.|:||||.:.|.|..|.||||||||||.|:|||..:||..|.|:|.||||||||
Human    14 PRIMRLVAECSRSRARAGELWLPHGTVATPVFMPVGTQATMKGITTEQLDALGCRICLGNTYHLG 78

  Fly    73 LRPGIETLKKAGGLHKFMGWPRAILTDSGGFQMVSLLQLAEIDEHGVNFRSPFDNSQCMLTPEHS 137
            ||||.|.::||.|||.||.||..:||||||||||||:.|:|:.|.||.||||:|.::.:|:||.|
Human    79 LRPGPELIQKANGLHGFMNWPHNLLTDSGGFQMVSLVSLSEVTEEGVRFRSPYDGNETLLSPEKS 143

  Fly   138 IEIQNAIGGDIMMQLDDVVKTTTTGPRVEEAMERTIRWVDRCIEAHARDDDQSLFPIVQGGLDVP 202
            ::||||:|.||:|||||||.:|.|||||||||.|:|||:||||.||.|.|.|:||.|:|||||..
Human   144 VQIQNALGSDIIMQLDDVVSSTVTGPRVEEAMYRSIRWLDRCIAAHQRPDKQNLFAIIQGGLDAD 208

  Fly   203 LRQRCVSALMERQVRGFAVGGLSGGESKHDFWRMVDVCTGYLPKDKPRYLMGVGFAADLVVCVAL 267
            ||..|:..:.:|.|.|||:|||||||||..|||||.:.|..|||||||||||||:|.||||||||
Human   209 LRATCLEEMTKRDVPGFAIGGLSGGESKSQFWRMVALSTSRLPKDKPRYLMGVGYATDLVVCVAL 273

  Fly   268 GIDMFDCVFPTRTARFGCALVDSGQLNLKQPKYKLDMEPIDKDCDCSTCRRYTRSYLHHIATNES 332
            |.|||||||||||||||.|||.:|.|.|::..::.|..|||.:|.|.||::::|::||.:..:::
Human   274 GCDMFDCVFPTRTARFGSALVPTGNLQLRKKVFEKDFGPIDPECTCPTCQKHSRAFLHALLHSDN 338

  Fly   333 VSS-SLLSIHNVAYQLRLMRSMREAIQRDEFPQFVADFMARHFKAEPV--PAWIREALSAVNIQL 394
            .:: ..|::||:||||:||.::|.:|....||.||.|||...: .:|.  |.|..:||::|.|.|
Human   339 TAALHHLTVHNIAYQLQLMSAVRTSIVEKRFPDFVRDFMGAMY-GDPTLCPTWATDALASVGITL 402

  Fly   395  394
            Human   403  402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TgtNP_608585.1 TGT 20..375 CDD:460299 216/355 (61%)
QTRT1NP_112486.1 TGT 26..381 CDD:460299 216/354 (61%)
RNA binding. /evidence=ECO:0000255|HAMAP-Rule:MF_03218 260..266 4/5 (80%)
RNA binding, important for wobble base 34 recognition. /evidence=ECO:0000255|HAMAP-Rule:MF_03218 284..288 3/3 (100%)

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