DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4896 and RBM10

DIOPT Version :10

Sequence 1:NP_608583.5 Gene:CG4896 / 33305 FlyBaseID:FBgn0031319 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001191397.1 Gene:RBM10 / 8241 HGNCID:9896 Length:995 Species:Homo sapiens


Alignment Length:1078 Identity:333/1078 - (30%)
Similarity:475/1078 - (44%) Gaps:257/1078 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SFSGGNGNGSESGYRRYSRSRSRSRERSRDRNEYRRRNSRSRSRERSSHY-RNDRSPDRDLYRDL 71
            |.|||......|  :|..|..|..|...:|. ||.||..|.   :|:..| ..|||.|       
Human    38 SSSGGGWEVKRS--QRLRRGPSSPRRPYQDM-EYERRGGRG---DRTGRYGATDRSQD------- 89

  Fly    72 INEDYEDQGNYNSR----QNLDQRHGEDKYDRRHADSQGRRDH-DSNYDKSGQDMDKDRDHRWKN 131
                  |.|...||    :::|.|    .|.|.:...:|:.|: ||:.::|.:|          :
Human    90 ------DGGENRSRDHDYRDMDYR----SYPREYGSQEGKHDYDDSSEEQSAED----------S 134

  Fly   132 YD-------RVSRERNHDDFDRGSERSSRSNDQRQFNNNGNSNSSSSYRDREKERDRDRRCSSDE 189
            |:       :..|.|.|.....|.....|..|.|          ...||..:.|.:.:.  ..:|
Human   135 YEASPGSETQRRRRRRHRHSPTGPPGFPRDGDYR----------DQDYRTEQGEEEEEE--EDEE 187

  Fly   190 DSDMASEFRQRGAYNSGSSVEPLNNIILFGLKKHVTEADIMGELIKVDLEPTSIRVMRKQQTGAS 254
            :.:.||                 |.::|..|.:..||.||.|:|....::...:|:||.:.:|.|
Human   188 EEEKAS-----------------NIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQS 235

  Fly   255 RCFAFVEFKTVEEATRWMELTQGVLQLGDHRVTMQYSHTR---ISDWTCIKCGASNFKRRFQCYM 316
            |.||||||..:::||||||..|..|.:...:|:|.||..:   ..||.|.|||..|||||.:|:.
Human   236 RGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFK 300

  Fly   317 CNASRAESENAL----------------------------YGA---------GEGVDEISQILTK 344
            |...::|:|..|                            |.|         .:|.:..|:....
Human   301 CGVPKSEAEQKLPLGTRLDQQTLPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSENAND 365

  Fly   345 KIMLRGLDALTNEEGVLTALQQRLPELAKTVSKVLVSRDALTNASRGICYLNFDTLIDSMNVFNG 409
            .|:||.|:..:..:.:|.||   .|....:.|.|.|.:|..|..:||..::...|::::..:...
Human   366 TIILRNLNPHSTMDSILGAL---APYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVEAAQLLQI 427

  Fly   410 LTALDPPLTLDDKTVIVTYCIDSENRQMMPAEGNFFRAGETAMSPSAITAA-YTLADVPRLAEYS 473
            |.||.||||:|.||:.|.:...|: |.|...||:  |....:::.:||.|| :.::...:..|.:
Human   428 LQALHPPLTIDGKTINVEFAKGSK-RDMASNEGS--RISAASVASTAIAAAQWAISQASQGGEGT 489

  Fly   474 ASVYASNPLEHANYVQ--YYTDYYTTEIS-------KNCRDRQVT-----------EAN--SGA- 515
            .:.....|::::.|.|  .|.:...||.|       |..:...:|           ||:  .|| 
Human   490 WATSEEPPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEPGAD 554

  Fly   516 AVALSAIQRKQRKV--------------------SQMETTVS--VTEAKVAFLARGESA------ 552
            :|::.|..|.|...                    ||..|.:|  |.::::.......||      
Human   555 SVSMQAFSRAQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPTHPSSALPPATS 619

  Fly   553 PKGNDG-KKYDTPDVSKYQYDETSGYYYDHVTGLYYDAHSQYYYNNETGAYLYWDQKRSTYVLAT 616
            |...:. .:|..||||.||||||||||||..||||||.:||||||.::..|||||.:|.|||   
Human   620 PTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDGERRTYV--- 681

  Fly   617 PASTQAALKEVLADAEKKEEEAKKAKEKEKEKEEAGGKPDKVKVAKKIVKDMEKWAKQLN-QKKD 680
            ||..|:      ||..|:.....|..:::|||.       |.|.|::|.||||:||:.|| ||::
Human   682 PALEQS------ADGHKETGAPSKEGKEKKEKH-------KTKTAQQIAKDMERWARSLNKQKEN 733

  Fly   681 YTAVATPQPILSDTEAATTSRASQGAYADVGFSILEKK-----------ELGKL-NDYVPEAGPP 733
            :.....|...|.|.|      ..:.|.||.|::|||||           :|.|| :|..|  .||
Human   734 FKNSFQPISSLRDDE------RRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRP--SPP 790

  Fly   734 AISKLVGAYGGPSDSEDDNSANQKALEASVGTKRAISDESDYVDFQKLTCLLCMRAFQSLDILQK 798
              ..||.||.|.||||::....        |.:|    |....|:|||.||||.|.|.|.:.|.:
Human   791 --RGLVAAYSGESDSEEEQERG--------GPER----EEKLTDWQKLACLLCRRQFPSKEALIR 841

  Fly   799 HLKMSNLHKENLD-----KLKRN--PAVEAGTDEGLSYRDRAKERRLKYGESDPPPPNRSR---- 852
            |.::|.|||:||:     .|..|  .|:|....|.:.|||||.|||.|||..:||.|.|.:    
Human   842 HQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGI 906

  Fly   853 ----ERFEQEIKTLQSRQKDSFGATAAMPISSTNVGSRLMQKMGWSEGQGLGKKNQGRTEIIEAD 913
                ..|||.       .:|..|        |.|:|||::|.|||.||.|||:|.||....|||.
Human   907 STASVDFEQP-------TRDGLG--------SDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQ 956

  Fly   914 GRSNNVGLG--NNTGHMAPGNDYKSYIKKMMKQRYENA 949
            .|....|||  .::..:.....||..:.|.|..|:..|
Human   957 TRVRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNEA 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4896NP_608583.5 U2AF_lg 74..>158 CDD:273727 21/95 (22%)
RRM1_RBM5_like 211..291 CDD:409977 31/79 (39%)
ZnF_RBZ 296..320 CDD:197784 13/23 (57%)
RanBP2-type Zn finger 298..317 CDD:275376 11/18 (61%)
RRM1_RRM2_RBM5_like 343..429 CDD:409752 27/85 (32%)
OCRE_RBM5_like 562..617 CDD:293881 37/54 (69%)
OCRE repeat 1 567..574 CDD:293881 5/6 (83%)
OCRE repeat 2 575..582 CDD:293881 6/6 (100%)
OCRE repeat 3 583..590 CDD:293881 6/6 (100%)
OCRE repeat 4 591..598 CDD:293881 6/6 (100%)
OCRE repeat 5 600..607 CDD:293881 4/6 (67%)
G-patch 882..924 CDD:396249 23/43 (53%)
RBM10NP_001191397.1 RRM1_RBM10 193..276 CDD:410147 34/99 (34%)
ZnF_RBZ 280..304 CDD:197784 13/23 (57%)
RanBP2-type Zn finger 282..301 CDD:275376 11/18 (61%)
RRM2_RBM10 363..449 CDD:410148 27/88 (31%)
OCRE_RBM10 629..692 CDD:293886 43/71 (61%)
OCRE repeat 1 635..642 CDD:293886 5/6 (83%)
OCRE repeat 2 643..650 CDD:293886 6/6 (100%)
OCRE repeat 3 651..658 CDD:293886 6/6 (100%)
OCRE repeat 4 659..666 CDD:293886 6/6 (100%)
OCRE repeat 5 668..675 CDD:293886 4/6 (67%)
G-patch 923..967 CDD:396249 24/43 (56%)

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