Sequence 1: | NP_608583.5 | Gene: | CG4896 / 33305 | FlyBaseID: | FBgn0031319 | Length: | 949 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038955950.1 | Gene: | Rbm10 / 64510 | RGDID: | 631366 | Length: | 930 | Species: | Rattus norvegicus |
Alignment Length: | 1052 | Identity: | 326/1052 - (30%) |
---|---|---|---|
Similarity: | 463/1052 - (44%) | Gaps: | 266/1052 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 EYRRRNSRSRSRERSSHY-RNDRSPDRDLYRDLINEDYEDQGNYNSR----QNLDQRHGEDKYDR 99
Fly 100 RHADSQGRRDH-DSNYDKSGQDMDKDRDHRWKNYD-------RVSRERNHDDFDRGSERSSRSND 156
Fly 157 QRQFNNNGNSNSSSSYR----DREKERDRDRRCSSDEDSDMASEFRQRGAYNSGSSVEPLNNIIL 217
Fly 218 FGLKKHVTEADIMGELIKVDLEPTSIRVMRKQQTGASRCFAFVEFKTVEEATRWMELTQGVLQLG 282
Fly 283 DHRVTMQYSHTR---ISDWTCIKCGASNFKRRFQCYMCNASRAESENALYGAGEGVD-------- 336
Fly 337 -EISQ-------------ILTKK----------------IMLRGLDALTNEEGVLTALQQRLPEL 371
Fly 372 AKTVSKVLVSRDALTNASRGICYLNFDTLIDSMNVFNGLTALDPPLTLDDKTVIVTYCIDSENRQ 436
Fly 437 MMPAEGNFFRAGETAMSPSAITAA-YTLADVPRLAEYSASVYASNPLEHANYVQ-------YYTD 493
Fly 494 -YYTTEISKNCRDRQVTEA---NSGA-----------AVALSAIQRKQRKV-------------- 529
Fly 530 ------SQMETTVSVTEAKVAFL-----------ARGESAPKGNDGKKYDTPDVSKYQYDETSGY 577
Fly 578 YYDHVTGLYYDAHSQYYYNNETGAYLYWDQKRSTYVLATPASTQAALKEVLADAEKKEEEAKKAK 642
Fly 643 EKEKEKEEAGGKPDKVKVAKKIVKDMEKWAKQLN-QKKDYTAVATPQPILSDTEAATTSRASQGA 706
Fly 707 YADVGFSILEKK-----------ELGKL-NDYVPEAGPPAISKLVGAYGGPSDSEDDNSANQKAL 759
Fly 760 EASVGTKRAISDESDYVDFQKLTCLLCMRAFQSLDILQKHLKMSNLHKENLD-----KLKRN--P 817
Fly 818 AVEAGTDEGLSYRDRAKERRLKYGESDPPPPNRSR--------ERFEQEIKTLQSRQKDSFGATA 874
Fly 875 AMPISSTNVGSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLG--NNTGHMAPGNDYKSY 937
Fly 938 IKKMMKQRYENA 949 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4896 | NP_608583.5 | DUF1777 | 91..>158 | CDD:285811 | 15/74 (20%) |
RRM1_RBM5_like | 211..291 | CDD:241005 | 31/79 (39%) | ||
ZnF_RBZ | 296..320 | CDD:197784 | 13/23 (57%) | ||
RanBP2-type Zn finger | 298..317 | CDD:275376 | 11/18 (61%) | ||
RRM1_RRM2_RBM5_like | 343..429 | CDD:240759 | 28/101 (28%) | ||
OCRE_RBM5_like | 562..617 | CDD:293881 | 36/54 (67%) | ||
OCRE repeat 1 | 567..574 | CDD:293881 | 5/6 (83%) | ||
OCRE repeat 2 | 575..582 | CDD:293881 | 6/6 (100%) | ||
OCRE repeat 3 | 583..590 | CDD:293881 | 6/6 (100%) | ||
OCRE repeat 4 | 591..598 | CDD:293881 | 6/6 (100%) | ||
OCRE repeat 5 | 600..607 | CDD:293881 | 4/6 (67%) | ||
G-patch | 882..922 | CDD:279867 | 21/39 (54%) | ||
Rbm10 | XP_038955950.1 | RRM | 21..>233 | CDD:223796 | 76/270 (28%) |
RRM1_RBM10 | 129..212 | CDD:410147 | 34/99 (34%) | ||
ZnF_RBZ | 216..240 | CDD:197784 | 13/23 (57%) | ||
RanBP2-type Zn finger | 218..237 | CDD:275376 | 11/18 (61%) | ||
RRM2_RBM10 | 299..385 | CDD:410148 | 27/88 (31%) | ||
OCRE_RBM10 | 564..627 | CDD:293886 | 42/71 (59%) | ||
OCRE repeat 1 | 570..577 | CDD:293886 | 5/6 (83%) | ||
OCRE repeat 2 | 578..585 | CDD:293886 | 6/6 (100%) | ||
OCRE repeat 3 | 586..593 | CDD:293886 | 6/6 (100%) | ||
OCRE repeat 4 | 594..600 | CDD:293886 | 5/5 (100%) | ||
OCRE repeat 5 | 602..609 | CDD:293886 | 3/6 (50%) | ||
G-patch | 858..902 | CDD:396249 | 24/43 (56%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166346526 | |
Domainoid | 1 | 1.000 | 124 | 1.000 | Domainoid score | I5376 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H31330 | |
Inparanoid | 1 | 1.050 | 370 | 1.000 | Inparanoid score | I2065 |
OMA | 1 | 1.010 | - | - | QHG55750 | |
OrthoDB | 1 | 1.010 | - | - | D786674at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002462 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9109 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102541 | |
Panther | 1 | 1.100 | - | - | O | PTHR13948 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1642 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.910 |