DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4896 and LOC567058

DIOPT Version :9

Sequence 1:NP_608583.5 Gene:CG4896 / 33305 FlyBaseID:FBgn0031319 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_005166176.1 Gene:LOC567058 / 567058 -ID:- Length:1393 Species:Danio rerio


Alignment Length:1103 Identity:258/1103 - (23%)
Similarity:407/1103 - (36%) Gaps:327/1103 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ERSRDRNEYRRRNSRSRSRERSSHYRNDRSPDRDLYRDLINEDYEDQGNYNSRQ----------- 86
            |||:.:...|.|.|....:|.:...|::|.|....:......|:.      ||:           
Zfish   425 ERSQFKERDRERPSAYLGKESTGFNRSEREPKHQHWEKNTPSDFP------SRELGTQKPPPIQM 483

  Fly    87 ----NLDQRHGEDKY--DR-----RHADSQGRRDH--DSNYDKSGQDMDKDRDHRWKNYDRVSRE 138
                |:..|.||..:  ||     |.|.:.||..:  |.|        ..:::|.:|:       
Zfish   484 DPTLNVQGREGEKSWPVDREEKPERTAPAGGRPPYFQDKN--------SPNQEHHFKS------- 533

  Fly   139 RNHDDFDRGSERSSRSNDQRQFNNNGNSNSSSSYRDR--EKERDRDRRCSS-------------- 187
             |...|....:|:|....||:...:|.....|:..::  :..||.|.|..|              
Zfish   534 -NRVPFKGSGDRASDQEPQRESLMSGPKEMQSNRGEQLDQDYRDIDYRTGSGRKYDYSLGDLHGL 597

  Fly   188 ---------------DEDSDMASEFRQRGAYNSGSSVEPLNNIILFGLKKHVTEADIMGELIKVD 237
                           |:......::|..|..:     :..|.|.:.|:.|:.|...|:|.....|
Zfish   598 EKDVKESKLVPVERVDDSGSQDQDYRSAGVQD-----KITNTIAISGIPKNATMQQILGAFAVRD 657

  Fly   238 LEPTSIRVMRKQQTGASRCFAFVEFKTVEEATRWMELTQGVLQLGDHRVTMQYSHTRISDWTCIK 302
            ..|.....::....|.|...|:|||..:|:|..:||..||.:::||....::|..   ||     
Zfish   658 GVPMQGMKIKDVVPGYSFDTAYVEFLNLEDAVHFMESNQGSVKVGDKTALLKYVQ---SD----- 714

  Fly   303 CGASNFKRRFQCYMCNASRA---------------ESENA----LYGAGEGVDEISQILTKKIML 348
               .|.|.:.......|:.|               :.|.|    |..|.:||.:.|..||.:...
Zfish   715 ---KNGKEQLHEPPTKATPASDDGLLPNPVPPPNKQEETAVKPLLDAASQGVWQRSSNLTPEAWQ 776

  Fly   349 RGLD--------------ALTNEEGVLTALQQRLPELAKTVSKVLVSRDALTNASRGICYLNFDT 399
            :.:|              ..||:......||...|...:  ||.::.::.|..           |
Zfish   777 QQVDQQQQQQELEQQPTEEWTNQRASRQNLQYSDPVFKE--SKTMIIKNILPT-----------T 828

  Fly   400 LIDSMNVFNGLTALDPPLTLDDKTVIVT---------YC-IDSENRQMMPAEGNFFRAGETAMSP 454
            .::::     |.||||...||::.|.:.         :| :|.::.:      :..|..|....|
Zfish   829 TVETI-----LKALDPFAYLDERNVRLVKGKSPGSKCFCFVDMDSHE------HVTRLVELLTKP 882

  Fly   455 SAITAAYTLADVPRLAEYSASVYA--SNPLEHANY---------------------------VQY 490
            ..|     :.|..|       |||  :.||::.||                           .|:
Zfish   883 RPI-----MIDGVR-------VYAEVAKPLKNQNYRRDNEKANTSLLGLPPDVIKQQPYQQPQQF 935

  Fly   491 YTDYYTTEISKNCRDRQVTEAN---SGAAVALSAIQR--KQRKVSQMETTVSVTEAKVAFL--AR 548
            |.....|.:........:..|:   |..||..|::.:  .....|.:..||...|.:...|  |.
Zfish   936 YPQPVLTAVGAASIQGDLIGADATLSSVAVPSSSLTQGVMYSNKSAIAQTVQTAEQQAPALSDAA 1000

  Fly   549 GESAPKGNDGKKY--DTPDVSKYQYDETSGYYYDHVTGLYYDAHSQYYYNNETGAYLYWDQKRST 611
            ...|....||..|  :.||:|.:.||.|||:|||..|.||||.:|:|:|:.:...|||||....|
Zfish  1001 VSGAADSIDGYNYGSEAPDLSAFLYDATSGFYYDPQTTLYYDPNSRYFYDAQNQQYLYWDSSLKT 1065

  Fly   612 YVLATPASTQA--------------------------------ALKEVLADAEKKEEEAKKAKEK 644
            |:....:||..                                |:.|.|.:...:||..::.:::
Zfish  1066 YIPVQSSSTDGQNVPEVPAPEVPAPVTPVAEVIAVPIKEEEAKAVSEALPEVRVEEEPGQRGEKR 1130

  Fly   645 EKEKEEAGGKPDKVKVAKKIVKDMEKWAKQLNQKKDYTAVATPQPILSDTEAATTSRASQGAYAD 709
            ||||||   ||..: .|.||:||||:|||..|.||:  :|..|.|:|...:....|:|     ||
Zfish  1131 EKEKEE---KPRSL-AAFKIMKDMERWAKIQNSKKE--SVRAPSPVLKSGDDHRPSKA-----AD 1184

  Fly   710 VGFSILEKK----ELGKLNDYVPEAGPP------------AISKLVGAYGGPSDSEDDNSAN-QK 757
            ..|:|.|:|    ||.|    .|.|.|.            ::..|...||..||.|::...: |:
Zfish  1185 AAFAIFERKTGADELFK----KPLAPPKQKDEKSSKRPMGSLGMLAADYGAGSDEEEEEKHDKQE 1245

  Fly   758 ALEASVGTKRAISDESDYVDFQKLTCLLCMRAFQSLDILQKHLKMSNLHKENLD---KLKRNP-A 818
            |...:....:|...|....|::|:.||||.|.|.:.|.|.:|.::|:|||:|::   |:||:. .
Zfish  1246 ASRPAKSQPQADEKEDRLTDWKKMACLLCRRQFPNKDALIRHQQLSDLHKQNMEIHLKIKRSKRE 1310

  Fly   819 VEAGTDEGLSYRDRAKERRLKYGESDPPPPNRSRERFEQEIKTLQSRQKDSFGATAAMPISSTNV 883
            :||       ..::.||.:.|...|.|....|..:      .|.....:|||..           
Zfish  1311 LEA-------LENQEKEMKTKAPGSSPEAKRRKPQ------NTWAGSSRDSFKG----------- 1351

  Fly   884 GSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLGNNTGHMAPGNDYKSYIKKMMKQRY 946
                      ||..|||.:...|        :.....:.|:.       .||..::|.|..|:
Zfish  1352 ----------SERPGLGLETTER--------KKKEPVVWNHA-------TYKQAVRKAMFARF 1389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4896NP_608583.5 DUF1777 91..>158 CDD:285811 17/75 (23%)
RRM1_RBM5_like 211..291 CDD:241005 23/79 (29%)
ZnF_RBZ 296..320 CDD:197784 4/23 (17%)
RanBP2-type Zn finger 298..317 CDD:275376 2/18 (11%)
RRM1_RRM2_RBM5_like 343..429 CDD:240759 19/108 (18%)
OCRE_RBM5_like 562..617 CDD:293881 26/54 (48%)
OCRE repeat 1 567..574 CDD:293881 3/6 (50%)
OCRE repeat 2 575..582 CDD:293881 5/6 (83%)
OCRE repeat 3 583..590 CDD:293881 5/6 (83%)
OCRE repeat 4 591..598 CDD:293881 3/6 (50%)
OCRE repeat 5 600..607 CDD:293881 4/6 (67%)
G-patch 882..922 CDD:279867 6/39 (15%)
LOC567058XP_005166176.1 RRM_SF 633..710 CDD:302621 23/76 (30%)
RRM_SF 815..899 CDD:302621 23/119 (19%)
OCRE_RBM5_like 1017..1070 CDD:293881 26/52 (50%)
OCRE repeat 1 1021..1028 CDD:293881 3/6 (50%)
OCRE repeat 2 1029..1036 CDD:293881 5/6 (83%)
OCRE repeat 3 1037..1044 CDD:293881 5/6 (83%)
OCRE repeat 4 1045..1052 CDD:293881 3/6 (50%)
OCRE repeat 5 1054..1061 CDD:293881 4/6 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587909
Domainoid 1 1.000 116 1.000 Domainoid score I5905
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D786674at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.040

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