DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4896 and Gm15455

DIOPT Version :10

Sequence 1:NP_608583.5 Gene:CG4896 / 33305 FlyBaseID:FBgn0031319 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001155288.1 Gene:Gm15455 / 433287 MGIID:3705563 Length:852 Species:Mus musculus


Alignment Length:980 Identity:296/980 - (30%)
Similarity:425/980 - (43%) Gaps:256/980 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 KYDRR--HADSQGRRD-HDSNYDKSGQDMDKDRDHRWKNYDRVSRERNHDDFDRGSERSSRSNDQ 157
            :|:||  ..|..||.. .|.:.|.||::..:|.|:|...|....||                   
Mouse     2 EYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMEYRSYPRE------------------- 47

  Fly   158 RQFNNNGNSNSSSSYRDREKERDRDRRCSSDEDSDMASEFRQRGAYNSGSSVEPLNNIILFGLKK 222
                 .|.......|.|           ||:|.|                               
Mouse    48 -----YGRQEGKHEYDD-----------SSEEQS------------------------------- 65

  Fly   223 HVTEADIMGELIKVDLEPTSIRVMRKQQTGASRCFAFVEFKTVEEATRWMELTQGVLQLGDHRVT 287
                |:|.|:|....::...:|:||.:.:|.|:.||||||..:::.|||||..|..|.:...:|:
Mouse    66 ----AEIRGQLKSHGVKAREVRLMRNKSSGQSQGFAFVEFSHLQDTTRWMEANQHSLNILGQKVS 126

  Fly   288 MQYS--HTRISD-WTCIKCGASNFKRRFQCYMCNASRAESENALYGAGEGVD---------EISQ 340
            |.||  :.:|:: |.|.|||..|||||.:|:.|...::|:|..| ..|..:|         |:||
Mouse   127 MHYSDPNPKINENWLCNKCGVQNFKRREKCFKCGMPKSEAEQKL-PLGTRLDQQALPLGRRELSQ 190

  Fly   341 -------------ILTKK----------------IMLRGLDALTNEEGVLTALQQRLPELAKTVS 376
                         :||.:                |:||.|:..:..:.:|.||   .|....:.|
Mouse   191 GLLPQLQPYQAQGVLTSQALSQGSEPSSENASDTIILRNLNPHSTMDSILGAL---APYAVLSSS 252

  Fly   377 KVLVSRDALTNASRGICYLNFDTLIDSMNVFNGLTALDPPLTLDDKTVIVTYCIDSENRQMMPAE 441
            .|.|.:|..|..:||..::...|::::..:...|.||.||||:|.||:.|.:...|: |.|...|
Mouse   253 NVRVIKDKQTQLNRGFAFIQLSTIVEAAQLLQILQALHPPLTIDGKTINVEFAKGSK-RGMASNE 316

  Fly   442 GNFFRAGETAMSPSAITAA-YTLADVPRLAEYSASVYASNPLEHANYVQ---YYTDYYTTEISKN 502
            |:  |....:::.:||.|| :.::...:..|.:.:.....||:::.|.|   |.:...|..:..:
Mouse   317 GS--RINAASVASAAIAAAQWAISQASQGGESAWAAPEEPPLDYSYYQQDEGYGSSQGTDSLYAH 379

  Fly   503 --CRDRQ----------------VTEANSGA-AVALSAIQRKQRKV------------------- 529
              .:|.:                .|...:|| :|:|.|....|...                   
Mouse   380 GYLKDSKGPGMTGTKGDPAGAGPETSLEAGADSVSLQAFSPAQPGAAPGLYQQSAEGGSGQSTAT 444

  Fly   530 -SQMETTVS--VTEAKVAFLARGESA------PKGNDG-KKYDTPDVSKYQYDETSGYYYDHVTG 584
             ||..|.:|  |.::::.......||      |...:. .:|..||||.||||||||||||..||
Mouse   445 NSQSYTIISPAVLKSELQSPTHPSSALPPASSPTALESYSQYPVPDVSTYQYDETSGYYYDSQTG 509

  Fly   585 LYYDAHSQYYYNNETGAYLYWDQKRSTYVLATPASTQAALKEVLADAEKKEEEAKKAKEKEKEKE 649
            ||||.:.|||||.::..|||||.:..||:   ||..|:      ||..|....:.|..:::|||.
Mouse   510 LYYDPNYQYYYNAQSQQYLYWDGEWRTYI---PALEQS------ADGHKDMRASSKEGKEKKEKH 565

  Fly   650 EAGGKPDKVKVAKKIVKDMEKWAKQLN-QKKDYTAVATPQPILSDTEAATTSRASQGAYADVGFS 713
                   |.|.|::|.||||:|.:.|| ||:::.....|...|.|.|      ..:.|.||.|::
Mouse   566 -------KTKTAQQIAKDMERWVRSLNKQKENFKNSFQPISALRDDE------RRESATADAGYA 617

  Fly   714 ILEK-----------KELGKL-NDYVPEAGPPAISKLVGAYGGPSDSEDDNSANQKALEASVGTK 766
            ||||           |:|.|| :|..|  .||  ..||.||.|.||||:.....        |.:
Mouse   618 ILEKKGALAERQHTSKDLPKLASDDRP--SPP--RGLVAAYSGESDSEEKQERG--------GPE 670

  Fly   767 RAISDESDYVDFQKLTCLLCMRAFQSLDILQKHLKMSNLHKENLD-----KLKRN--PAVEAGTD 824
            |    |....|:|||.||||.|.|.|.:.|.:|.::|.|||:||:     .|..|  .|:|....
Mouse   671 R----EEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDT 731

  Fly   825 EGLSYRDRAKERRLKYGESDPPPPNRSR--------ERFEQEIKTLQSRQKDSFGATAAMPISST 881
            |.:.|||||.|||.|||..:||.|.|.:        ..|||.       .:|..|        |.
Mouse   732 EQMKYRDRAAERREKYGIPEPPEPKRRKYGGISSASVDFEQP-------TRDGLG--------SD 781

  Fly   882 NVGSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLG--NNTGHMAPGNDYKSYIKKMMKQ 944
            |:|||::|.|||.||.|||:|.||....|||..|....|||  .::..:.....||..:.|.|..
Mouse   782 NIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVPGSGLGARGSSYGVTSTESYKKTLHKTMVT 846

  Fly   945 RYENA 949
            |:..|
Mouse   847 RFNEA 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4896NP_608583.5 U2AF_lg 74..>158 CDD:273727 16/64 (25%)
RRM1_RBM5_like 211..291 CDD:409977 24/79 (30%)
ZnF_RBZ 296..320 CDD:197784 12/24 (50%)
RanBP2-type Zn finger 298..317 CDD:275376 11/18 (61%)
RRM1_RRM2_RBM5_like 343..429 CDD:409752 28/101 (28%)
OCRE_RBM5_like 562..617 CDD:293881 34/54 (63%)
OCRE repeat 1 567..574 CDD:293881 5/6 (83%)
OCRE repeat 2 575..582 CDD:293881 6/6 (100%)
OCRE repeat 3 583..590 CDD:293881 6/6 (100%)
OCRE repeat 4 591..598 CDD:293881 5/6 (83%)
OCRE repeat 5 600..607 CDD:293881 4/6 (67%)
G-patch 882..924 CDD:396249 23/43 (53%)
Gm15455NP_001155288.1 RRM_SF 67..134 CDD:473069 25/66 (38%)
ZnF_RBZ 140..162 CDD:197784 12/21 (57%)
RanBP2-type Zn finger 140..159 CDD:275376 11/18 (61%)
RRM2_RBM10 221..307 CDD:410148 27/88 (31%)
OCRE_RBM10 486..549 CDD:293886 40/71 (56%)
OCRE repeat 1 492..499 CDD:293886 5/6 (83%)
OCRE repeat 2 500..507 CDD:293886 6/6 (100%)
OCRE repeat 3 508..515 CDD:293886 6/6 (100%)
OCRE repeat 4 516..523 CDD:293886 5/6 (83%)
OCRE repeat 5 525..532 CDD:293886 4/6 (67%)
G-patch 780..824 CDD:396249 24/43 (56%)

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