DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4896 and CG31550

DIOPT Version :9

Sequence 1:NP_608583.5 Gene:CG4896 / 33305 FlyBaseID:FBgn0031319 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001262285.1 Gene:CG31550 / 40661 FlyBaseID:FBgn0051550 Length:835 Species:Drosophila melanogaster


Alignment Length:379 Identity:75/379 - (19%)
Similarity:136/379 - (35%) Gaps:83/379 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   625 KEVLADAEKKEEEAKKAK------------EKEKEKEEAGGKPDKVKVAKKIVKDMEKWAKQLNQ 677
            |:..|:.:::.|..|.::            ::.:|::.:....||......|..|.:...:.:..
  Fly   461 KQQRAERQREREHQKLSRDHQPQATEQTDAQQHREEQHSNSAADKYDPESAISADFDSDDEYMRG 525

  Fly   678 KKDYTAVATPQPI-----LSDTEAATTSRASQGAYADVGFSILE--------------KKELGKL 723
            ..|.......:.|     |||.|......|:.|...|......:              |...|:.
  Fly   526 MMDRNRDNIKRRIECRNELSDEERREREEAASGEPPDGDDQDDQDDKESQRQRRKRERKSRWGEK 590

  Fly   724 NDYVPEAGPPAISKLVGAYGGPSDSEDDNSANQKALEASVGTKRAISDESDYVDFQKLTCLLCMR 788
            ...:|.      |...|.:|         :.|:..|.....|..|:      :.:.:|.......
  Fly   591 EQQLPS------SSTSGNFG---------NQNKPILSGITRTDPAL------LQYARLNYGSTQL 634

  Fly   789 AFQSLDILQKHLKMSNLH------KENLDKLKR----------NPAVEAGTDE-----------G 826
            :.:.....::|.|::.|:      ::.:|:|.|          :..:|.||.|           .
  Fly   635 SEEQWKQCEEHYKVNLLYQDMMRKRQEIDRLARGGKFKYEYDSDEDIEGGTWEHKLRTAEMEATS 699

  Fly   827 LSYRDRAKERRLKYGESDPPPPNRSRERFEQEIKTLQSRQKDSFGATAAMPISSTNVGSRLMQKM 891
            |......|:...|:...|..||...::..||......:||.| ........:...|:|.:::||:
  Fly   700 LWANALTKQSEGKHHIGDFLPPEELKKFMEQYEAKKNNRQPD-LSDYKEYKLKEDNIGFQMLQKL 763

  Fly   892 GWSEGQGLGKKNQGRTE-IIEADGRSNNVGLGNNTGHMAP--GNDYKSYIKKMM 942
            ||.||||||:...|..: :.:|..|..|.|||.::.....  .|:|.:|.|:||
  Fly   764 GWKEGQGLGQDGAGIVDPVNKAPQRDGNQGLGVSSAAQPEDCDNEYDAYRKRMM 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4896NP_608583.5 DUF1777 91..>158 CDD:285811
RRM1_RBM5_like 211..291 CDD:241005
ZnF_RBZ 296..320 CDD:197784
RanBP2-type Zn finger 298..317 CDD:275376
RRM1_RRM2_RBM5_like 343..429 CDD:240759
OCRE_RBM5_like 562..617 CDD:293881
OCRE repeat 1 567..574 CDD:293881
OCRE repeat 2 575..582 CDD:293881
OCRE repeat 3 583..590 CDD:293881
OCRE repeat 4 591..598 CDD:293881
OCRE repeat 5 600..607 CDD:293881
G-patch 882..922 CDD:279867 17/40 (43%)
CG31550NP_001262285.1 G-patch 753..797 CDD:279867 19/43 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D786674at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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