Sequence 1: | NP_608583.5 | Gene: | CG4896 / 33305 | FlyBaseID: | FBgn0031319 | Length: | 949 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001093608.3 | Gene: | rbm5 / 324302 | ZFINID: | ZDB-GENE-030131-3022 | Length: | 835 | Species: | Danio rerio |
Alignment Length: | 912 | Identity: | 281/912 - (30%) |
---|---|---|---|
Similarity: | 433/912 - (47%) | Gaps: | 133/912 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 77 EDQGNYNSRQNLDQRHGEDKYDRRHADSQGRRDHDSNYDKSGQDMDKDRDHRWKNYDRVSRERNH 141
Fly 142 DDFDRGSERSSRSNDQRQFNNNGNSNSSSSYRDREKERDRDRRCSSDEDSDMASEFRQRGAYNSG 206
Fly 207 SSVEPLNNIILFGLKKHVTEADIMGELIKVDL----EPTSIRVMRKQQTGASRCFAFVEFKTVEE 267
Fly 268 ATRWMELTQGVLQLGDHRVTMQYSHTR--ISDWTCIKCGASNFKRRFQCYMCNASRAESENALYG 330
Fly 331 AGEGVDEISQILTKKIMLRGLDALTNEEGVLTAL---QQRLPELAKTVSKVLVSRDALTNASRGI 392
Fly 393 CYLNFDTLIDSMNVFNGLTALDPPLTLDDKTVIVTYCIDSENRQMMPAEGNFFRAGETAMSPSAI 457
Fly 458 TAAYTLADVPRLAEYSASVYASNPLEHANYVQYYTDYYTTE-----------ISKNCRDRQVTEA 511
Fly 512 NSGAAVALSAIQRKQRKVSQME-------TTVSVTEAKVAFLARGESAPKGNDGKKYDTPDVSKY 569
Fly 570 QYDETSGYYYDHVTGLYYDAHSQYYYNNETGAYLYWDQKRSTYVLATPASTQAALKEVLADAEKK 634
Fly 635 EEEAKKAKEKEKEKEEAGGKPDKVKVAKKIVKDMEKWAKQLNQKKDYTAVATPQPILSDTEAATT 699
Fly 700 SRASQGAYADVGFSILEKKELGKLNDYVPEAGPPAISK-------LVGAYGGPSDSEDDNSANQK 757
Fly 758 ALEASVGTKRAISDESDYVDFQKLTCLLCMRAFQSLDILQKHLKMSNLHKENLDKLKRNPAVEAG 822
Fly 823 TDE------GLSYRDRAKERRLKYGESDPPPPNRSRERFEQEIKTLQSRQKDSFGATAAMPISST 881
Fly 882 NVGSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLG--NNTGHMAPGNDYKSYIKKMMKQ 944
Fly 945 RY 946 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4896 | NP_608583.5 | DUF1777 | 91..>158 | CDD:285811 | 19/66 (29%) |
RRM1_RBM5_like | 211..291 | CDD:241005 | 33/83 (40%) | ||
ZnF_RBZ | 296..320 | CDD:197784 | 11/23 (48%) | ||
RanBP2-type Zn finger | 298..317 | CDD:275376 | 9/18 (50%) | ||
RRM1_RRM2_RBM5_like | 343..429 | CDD:240759 | 24/88 (27%) | ||
OCRE_RBM5_like | 562..617 | CDD:293881 | 33/54 (61%) | ||
OCRE repeat 1 | 567..574 | CDD:293881 | 5/6 (83%) | ||
OCRE repeat 2 | 575..582 | CDD:293881 | 6/6 (100%) | ||
OCRE repeat 3 | 583..590 | CDD:293881 | 6/6 (100%) | ||
OCRE repeat 4 | 591..598 | CDD:293881 | 5/6 (83%) | ||
OCRE repeat 5 | 600..607 | CDD:293881 | 4/6 (67%) | ||
G-patch | 882..922 | CDD:279867 | 19/39 (49%) | ||
rbm5 | NP_001093608.3 | RRM_SF | 110..196 | CDD:302621 | 36/102 (35%) |
zf-RanBP | 198..225 | CDD:279035 | 12/26 (46%) | ||
RanBP2-type Zn finger | 202..221 | CDD:275375 | 9/18 (50%) | ||
RRM2_RBM5 | 246..331 | CDD:241199 | 25/90 (28%) | ||
OCRE_RBM5 | 478..533 | CDD:293887 | 33/54 (61%) | ||
OCRE repeat 1 | 483..490 | CDD:293887 | 5/6 (83%) | ||
OCRE repeat 2 | 491..498 | CDD:293887 | 6/6 (100%) | ||
OCRE repeat 3 | 499..506 | CDD:293887 | 6/6 (100%) | ||
OCRE repeat 4 | 507..514 | CDD:293887 | 5/6 (83%) | ||
OCRE repeat 5 | 516..523 | CDD:293887 | 4/6 (67%) | ||
G-patch | 763..807 | CDD:279867 | 22/43 (51%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170587907 | |
Domainoid | 1 | 1.000 | 116 | 1.000 | Domainoid score | I5905 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 335 | 1.000 | Inparanoid score | I2382 |
OMA | 1 | 1.010 | - | - | QHG55750 | |
OrthoDB | 1 | 1.010 | - | - | D786674at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002462 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6537 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102541 | |
Panther | 1 | 1.100 | - | - | O | PTHR13948 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1642 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.910 |