DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4896 and Gpatch8

DIOPT Version :10

Sequence 1:NP_608583.5 Gene:CG4896 / 33305 FlyBaseID:FBgn0031319 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001152964.1 Gene:Gpatch8 / 237943 MGIID:1918667 Length:1505 Species:Mus musculus


Alignment Length:227 Identity:61/227 - (26%)
Similarity:90/227 - (39%) Gaps:39/227 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRYGH---SFSGGNGNGSESGYRRYSRSRSRSRERSRDRNEYRRR------NSRSRSRERSSHYR 58
            ||..|   ..||...:...|.:|.:.:|.|:..|...:..|....      :..||||.||.|..
Mouse   800 SRSSHRSQPSSGDEDSDDASSHRLHQKSPSQYSEEEEEEEEEEEEEDEDSGSEHSRSRSRSGHRH 864

  Fly    59 NDRSPDRDLYRDLINEDYEDQGNYNSRQNLDQRHGEDKY------DRRHADSQGRRDHDSNYDKS 117
            :.....|..|.. .::...||..| |||:   .:.:|.|      .|||:    :|.|||:....
Mouse   865 SSHRSSRRSYSS-SSDASSDQSCY-SRQH---SYSDDSYSDYSDRSRRHS----KRSHDSDDSDY 920

  Fly   118 GQDMDKDRDHRWKNYDRVSRERNHDDFDRGSERS---SRSNDQRQFNNNGNSNSSSSYRDREKER 179
            .....:.:.|::.:.|        ||:.....:|   |||:.:.:..:.|.|.|||..|.|.|.|
Mouse   921 TSSKHRSKRHKYSSSD--------DDYSLSCSQSRSRSRSHTRERSRSRGRSRSSSCSRSRSKRR 977

  Fly   180 DRDRRCSSDEDSDMASEFRQRG----AYNSGS 207
            .|.....|.:.|...|..|.|.    :..|||
Mouse   978 SRSTTAHSWQRSRSYSRDRSRSTRSPSQRSGS 1009

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4896NP_608583.5 U2AF_lg 74..>158 CDD:273727 23/92 (25%)
RRM1_RBM5_like 211..291 CDD:409977
ZnF_RBZ 296..320 CDD:197784
RanBP2-type Zn finger 298..317 CDD:275376
RRM1_RRM2_RBM5_like 343..429 CDD:409752
OCRE_RBM5_like 562..617 CDD:293881
OCRE repeat 1 567..574 CDD:293881
OCRE repeat 2 575..582 CDD:293881
OCRE repeat 3 583..590 CDD:293881
OCRE repeat 4 591..598 CDD:293881
OCRE repeat 5 600..607 CDD:293881
G-patch 882..924 CDD:396249
Gpatch8NP_001152964.1 G-patch 40..82 CDD:396249
PRK03918 <82..>207 CDD:235175
zf-C2H2_jaz 136..163 CDD:432381
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..244
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..393
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..537
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 575..1304 61/227 (27%)
Blue background indicates that the domain is not in the aligned region.

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