DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4896 and RBM6

DIOPT Version :10

Sequence 1:NP_608583.5 Gene:CG4896 / 33305 FlyBaseID:FBgn0031319 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_005768.1 Gene:RBM6 / 10180 HGNCID:9903 Length:1123 Species:Homo sapiens


Alignment Length:1163 Identity:244/1163 - (20%)
Similarity:393/1163 - (33%) Gaps:401/1163 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FSGGNG-----NGSESGYRRYSRSRS------RSRE----------------RSRDRN--EYRRR 44
            :.||:|     .|.|:.:..| |.|.      |.|:                |.||.:  ::|.|
Human   135 YRGGDGTSMDYRGREAPHMNY-RDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGRDGSHADFRGR 198

  Fly    45 NSRS---RSRERS-SHYRNDRSPDRDLYRDLINEDYEDQGNYNSRQNLDQRHGEDKYDRRHADSQ 105
            :...   |:||:| |.:||....|.| :||......:.:|..:...:||.|   |: |..|:|.:
Human   199 DLSDLDFRAREQSRSDFRNRDVSDLD-FRDKDGTQVDFRGRGSGTTDLDFR---DR-DTPHSDFR 258

  Fly   106 GRRDHDSNYDKSGQDM-------------------------DKDRDHRWKNYDRVSRERNHD--- 142
            ||....::.|..|::|                         .:||:|...|.:| ..|..||   
Human   259 GRHRSRTDQDFRGREMGSCMEFKDREMPPVDPNILDYIQPSTQDREHSGMNVNR-REESTHDHTI 322

  Fly   143 ---------------------------------DFDRG------------SERSSRSNDQRQFNN 162
                                             ||...            |.|..:|:|...|..
Human   323 ERPAFGIQKGEFEHSETREGETQGVAFEHESPADFQNSQSPVQDQDKSQLSGREEQSSDAGLFKE 387

  Fly   163 NGN----SNSSSSYRDREKERDRDRR-------------------CSSDEDSDMASEFRQRGAYN 204
            .|.    ....:.||..| .||.|.|                   .:.|...|:     |...|.
Human   388 EGGLDFLGRQDTDYRSME-YRDVDHRLPGSQMFGYGQSKSFPEGKTARDAQRDL-----QDQDYR 446

  Fly   205 SGSSVE-PLNNIILFGLKKHVTEADIMGELIKVDLEPTSIRVMRKQQTGASRCFAFVEFKTVEEA 268
            :|.|.| |...|.|.|:.:..|:.:|:......|..|.....:::..||....:..|||..:|:|
Human   447 TGPSEEKPSRLIRLSGVPEDATKEEILNAFRTPDGMPVKNLQLKEYNTGYDYGYVCVEFSLLEDA 511

  Fly   269 TRWMELTQGVLQLGDHRVTMQYSHTRISDWTCIKCGASNFKRRFQCYMCNASR----AESENALY 329
            ...||..||.|.:.|..||::|. :.:..|.|.:|.|:....|..|..|...|    |:.|...|
Human   512 IGCMEANQGTLMIQDKEVTLEYV-SSLDFWYCKRCKANIGGHRSSCSFCKNPREVTEAKQELITY 575

  Fly   330 --------------------------------------GAGEGVDEISQIL-------------- 342
                                                  ..|....|..:.|              
Human   576 PQPQKTSIPAPLEKQPNQPLRPADKEPEPRKREEGQESRLGHQKREAERYLPPSRREGPTFRRDR 640

  Fly   343 --------------TKKIMLRGLDALTNEEGVLTALQQRLPELAKTVSKVLVSRDALTNASRGIC 393
                          :|.|||:.:...|..|.::..|:   |.:..|.:.|.:.::..........
Human   641 ERESWSGETRQDGESKTIMLKRIYRSTPPEVIVEVLE---PYVRLTTANVRIIKNRTGPMGHTYG 702

  Fly   394 YLNFDTLIDSMNVFNGLTALDPPLTLDDKTVIVTYCIDSENRQMMPAEGNFFRAGETAMSPSAIT 458
            :::.|:..:::.|...|..||||.::|.|.|.|..           |.|.  |..::.       
Human   703 FIDLDSHAEALRVVKILQNLDPPFSIDGKMVAVNL-----------ATGK--RRNDSG------- 747

  Fly   459 AAYTLADVPRLAEYSASVYASNPLEHANYVQYYTDYYTTEISKNCRDRQVTEANSGAAVALSAIQ 523
                                    :|::::.||      :..|..|||:....||.    .|:..
Human   748 ------------------------DHSDHMHYY------QGKKYFRDRRGGGRNSD----WSSDT 778

  Fly   524 RKQRKVSQMETTVSVTEAKVAFLARGESAPKGNDGKKYDTPDVSKYQYDETSGYYYDHVTGLYYD 588
            .:|.:.|..:.                                  |.||..:|||||.:.|.|||
Human   779 NRQGQQSSSDC----------------------------------YIYDSATGYYYDPLAGTYYD 809

  Fly   589 AHSQYYYNNETGAYLYWDQKRSTYVLATPASTQAALKEVLADAEKKEEEAKKAKEKEKEKEEAGG 653
            .::|                :..||...|.         |.:.|:.:|:...::.|...|:|...
Human   810 PNTQ----------------QEVYVPQDPG---------LPEEEEIKEKKPTSQGKSSSKKEMSK 849

  Fly   654 KPDKVKVAKKIVKDMEKWAKQLNQKKDYTAVATPQPILSDTEAATTSRASQGAYADVGFSILEKK 718
            :..|.|..:.:.:..|..::.....:|......|..:                          ||
Human   850 RDGKEKKDRGVTRFQENASEGKAPAEDVFKKPLPPTV--------------------------KK 888

  Fly   719 ELGKLNDYVPEAGPP-----AISKLVGAYGGPSDSEDDNSANQ---------KALEASVGTKRAI 769
            |         |:.||     .:..|:|.|||.||.|::....|         :..:....||:. 
Human   889 E---------ESPPPPKVVNPLIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQKREEQTKKE- 943

  Fly   770 SDESDYVDFQKLTCLLCMRAFQSLDILQKHLKMSNLHKENLD---KLKRNPA----VEAGTDEGL 827
            ::|....|:.||.||||.|.|.:.::|.||.::|:|||:||:   |:|::..    :|....|| 
Human   944 NEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREG- 1007

  Fly   828 SYRDRAKERRLKYGESDPPPPNRSRERFEQEIKTLQSRQKDSFGATA-AMPISSTNVGSRLMQKM 891
            .::.|..:||.|....|  .|.|.|.::        ||:.||..... ...|.:::.|..:.|..
Human  1008 KFKGRGNDRREKLQSFD--SPERKRIKY--------SRETDSDRKLVDKEDIDTSSKGGCVQQAT 1062

  Fly   892 GWSEGQGLGKKNQGRTEIIEADGRSN--NVGLGNNTGHMAPGNDYKSYIKKMMKQRYE 947
            ||.:|.|||..:.|.....||:||..  :||....|........|:..::::|..||:
Human  1063 GWRKGTGLGYGHPGLASSEEAEGRMRGPSVGASGRTSKRQSNETYRDAVRRVMFARYK 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4896NP_608583.5 U2AF_lg 74..>158 CDD:273727 27/156 (17%)
RRM1_RBM5_like 211..291 CDD:409977 23/79 (29%)
ZnF_RBZ 296..320 CDD:197784 7/23 (30%)
RanBP2-type Zn finger 298..317 CDD:275376 6/18 (33%)
RRM1_RRM2_RBM5_like 343..429 CDD:409752 21/85 (25%)
OCRE_RBM5_like 562..617 CDD:293881 15/54 (28%)
OCRE repeat 1 567..574 CDD:293881 3/6 (50%)
OCRE repeat 2 575..582 CDD:293881 5/6 (83%)
OCRE repeat 3 583..590 CDD:293881 4/6 (67%)
OCRE repeat 4 591..598 CDD:293881 1/6 (17%)
OCRE repeat 5 600..607 CDD:293881 0/6 (0%)
G-patch 882..924 CDD:396249 15/43 (35%)
RBM6NP_005768.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..391 55/262 (21%)
YjbI 94..259 CDD:440968 34/129 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..454 7/45 (16%)
RRM1_RBM6 456..533 CDD:409753 22/76 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..654 4/79 (5%)
RRM2_RBM6 654..740 CDD:409979 22/99 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 741..787 13/88 (15%)
OCRE_RBM6 766..825 CDD:293882 21/121 (17%)
OCRE repeat 1 772..779 CDD:293882 2/10 (20%)
OCRE repeat 2 788..795 CDD:293882 3/40 (8%)
OCRE repeat 3 796..803 CDD:293882 5/6 (83%)
OCRE repeat 4 804..811 CDD:293882 4/6 (67%)
OCRE repeat 5 814..821 CDD:293882 2/6 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 827..948 28/156 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1004..1106 31/112 (28%)
G-patch 1051..1094 CDD:396249 14/42 (33%)

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