Protein Alignment CG4887 and AT5G08540

DIOPT Version :10

• Sequence 1: NP_608582.2
• Gene: CG4887 / 33304
• FlyBaseID: FBgn0031318
• Length: 1004
• Species: Drosophila melanogaster
• Sequence 2: NP_568200.1
• Gene: AT5G08540 / 830754
• AraportID: AT5G08540
• Length: 346
• Species: Arabidopsis thaliana
• Alignment Length: 250
• Identity: 51/250 - (20%)
• Similarity: 89/250 - (35%)
• Gaps: 54/250 - (21%)

  Fly   735 KKDYTAVATPQPILANEVATTSRGNQGGYADVGFSILEK-----KERGKLNDYAPNPTVGP---- 790
            ||....|..|.|......:......:....|:.: |.||     :..|.::...|.|.||.
plant    53 KKKSETVTAPTPAAKKNSSVEEETEEEVEEDMPW-IQEKALDLVEFTGSVSQAIPGPRVGSSKLP 116

  Fly   791 -MNKLVNAYGG----TSDSEEDNAASSQNTQSSAVVSGGGGAEESDYVDFHKLTCLLCKRAFQSL 850
             |..:..||.|    |:..:.....||...|...:|:               ...:||:    |:
plant   117 WMLAVPLAYAGVTFVTAFVKTVQKFSSPKAQRKKLVN---------------QNAMLCR----SI 162

  Fly   851 EILQKHLKMSTLHKENLAKLNQNTSSSIEEALAYRDRAKERRLKYGESDPPPPNRSRERFEQE-I 914
            :.|.:  |..|:|...|..|.|.|..::||.|       .:.::|..::.|        |..: :
plant   163 DELLR--KAGTVHSSELKALEQKTEFNMEEIL-------RKYIRYALNEKP--------FNPDLV 210

  Fly   915 KTLQSRQKQSTSATPAMPISSSNVGSRLLQKMG--WSEGQGLGRKNQGRTQIIEA 967
            ..|...:|.|......:|...:.:..|::::.|  ..:.||...|...|...::|
plant   211 ADLIHLRKASGLNDSQIPEILNEISRRIVKEKGPVVMKMQGFTEKGFKRKLAVQA 265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4887	NP_608582.2	U2AF_lg	93..>193	CDD:273727
		RRM_SF	255..335	CDD:473069
		ZnF_RBZ	341..364	CDD:197784
		RanBP2-type Zn finger	342..361	CDD:275377
		RRM1_RRM2_RBM5_like	387..473	CDD:409752
		OCRE_RBM5_like	623..678	CDD:293881
		OCRE repeat 1	628..635	CDD:293881
		OCRE repeat 2	636..643	CDD:293881
		OCRE repeat 3	644..651	CDD:293881
		OCRE repeat 4	652..659	CDD:293881
		OCRE repeat 5	661..668	CDD:293881
		G-patch	935..979	CDD:396249	6/34 (18%)
AT5G08540	NP_568200.1	None