| Sequence 1: | NP_001259859.1 | Gene: | CG4887 / 33304 | FlyBaseID: | FBgn0031318 | Length: | 1004 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001190909.1 | Gene: | AT4G34140 / 829562 | AraportID: | AT4G34140 | Length: | 530 | Species: | Arabidopsis thaliana |
| Alignment Length: | 524 | Identity: | 106/524 - (20%) |
|---|---|---|---|
| Similarity: | 170/524 - (32%) | Gaps: | 171/524 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 614 PKGNDGKIYPTPDVTQYQYDETSGYYYDSTTGLYYNAHSQYYYNNETGAY--LYWDQ-------- 668
Fly 669 ------------RRSTY------------VLATPASTQAA-------------------LQEVLA 690
Fly 691 DAEQKGEEESKKAKEKE---GGNKHDKVKVAKKIVKDME-----KWAKQLNQKKDYTAVATPQPI 747
Fly 748 LANEVATTSRGNQ--GGYADVGFS------------------ILEKKER---------GKLNDYA 783
Fly 784 PN--PTV------------------------GPMNKLVN-------------AYGGTSDSE-EDN 808
Fly 809 AASSQNTQSSAVVSGGG---------GAEESDYVDFH---------------KLTCLLCK-RAFQ 848
Fly 849 SLEILQKHLKMSTLHKENLAKLNQNTSSSIEE-ALAYRDRAKERRLKYGESDPPPPNRSR--ERF 910
Fly 911 EQEIKTLQSRQKQSTSATPAMPIS--SSNVGSRLLQKMGWSEGQGLGRKNQGRTQIIEADGRSNY 973
Fly 974 VGLG 977 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG4887 | NP_001259859.1 | DUF1777 | 115..>196 | CDD:285811 | |
| RRM_SF | 255..335 | CDD:302621 | |||
| ZnF_RBZ | 341..364 | CDD:197784 | |||
| RanBP2-type Zn finger | 342..361 | CDD:275375 | |||
| RRM1_RRM2_RBM5_like | 387..473 | CDD:240759 | |||
| OCRE_RBM5_like | 623..678 | CDD:293881 | 18/88 (20%) | ||
| OCRE repeat 1 | 628..635 | CDD:293881 | 2/6 (33%) | ||
| OCRE repeat 2 | 636..643 | CDD:293881 | 4/6 (67%) | ||
| OCRE repeat 3 | 644..651 | CDD:293881 | 3/6 (50%) | ||
| OCRE repeat 4 | 652..659 | CDD:293881 | 2/6 (33%) | ||
| OCRE repeat 5 | 661..668 | CDD:293881 | 3/8 (38%) | ||
| G-patch | 935..979 | CDD:279867 | 17/43 (40%) | ||
| AT4G34140 | NP_001190909.1 | OCRE | 10..60 | CDD:293880 | 17/50 (34%) |
| OCRE repeat 1 | 15..22 | CDD:293880 | 1/6 (17%) | ||
| OCRE repeat 2 | 23..30 | CDD:293880 | 2/6 (33%) | ||
| OCRE repeat 3 | 31..38 | CDD:293880 | 4/6 (67%) | ||
| OCRE repeat 4 | 39..45 | CDD:293880 | 3/5 (60%) | ||
| OCRE repeat 5 | 47..54 | CDD:293880 | 2/6 (33%) | ||
| G_patch | 479..524 | CDD:197727 | 17/45 (38%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | LDO | PTHR13948 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||