Sequence 1: | NP_001259859.1 | Gene: | CG4887 / 33304 | FlyBaseID: | FBgn0031318 | Length: | 1004 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001190084.1 | Gene: | SUA / 824590 | AraportID: | AT3G54230 | Length: | 1008 | Species: | Arabidopsis thaliana |
Alignment Length: | 1152 | Identity: | 272/1152 - (23%) |
---|---|---|---|
Similarity: | 426/1152 - (36%) | Gaps: | 338/1152 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 SFSGGSENEGGRGSDYYRSRPGSRYSRSRSRSRERNRSHGGIRHRNSRSRSRDRDRSPVFRN--- 69
Fly 70 DQHRGGRGGAGNGD-PDLYHSLIN-----DDYRDQDERNYNSRSNFENRQFRRHDSFDRRHRDRD 128
Fly 129 GESDRELNDYEYEQRSRDLDSRDRSSTDRDWYHNRSRSRE-HSRPWNRNNNHD-------DRSRS 185
Fly 186 NERN--TRHRDHRMYNGGGSNHNRDRDRDRDREQDRERDRDRDRDRERRGSSDYDSDEGHMRRNK 248
Fly 249 YRSTTEALNIIIIFGLTKEMTRADIMSELIKVNMEPA-CIRIIRKQGTDSSRGIAFVEFNTVEEA 312
Fly 313 KQWMD-ITQGVLKLNDERVSMRYSHK--------RIQ------------------DWNCNKCGVC 350
Fly 351 NFKFRFYCFVC---KTSREDSETTFSSGSEGVDEVS-TILTKKIMLRNLDALTNEEAVLTALQLH 411
Fly 412 --LKDLSKTVSKVLISRDSLTQASRGICYLHFDTLVDSMNVHNALTALDPPLTLDDRVVAITYCI 474
Fly 475 DLEEQQALPKNPKELAVKDSTVNSGNISAVSPSGLGGNYTLADVPRLAEYSASLYASNPA----E 535
Fly 536 HAYYVQYY-------TEYYTADINKNNRDSHLTEANSGAAVALSAIQRKQKKMSSIETTITAAAT 593
Fly 594 AAAQAAAQVKATLAAQVASAPKGNDGKIYPTPDVTQYQYDETSGYYYDSTTGLYYNAHSQYYYNN 658
Fly 659 ETGAYLYWDQRRSTYVLATPASTQAALQEVLADAEQKGEEESKK--------------------- 702
Fly 703 --------AKEKEGGNKHDKVKVAKK--IVKDMEKWAKQL---NQKKDYTAVATPQPILANEVAT 754
Fly 755 TSRGNQGGYADVGFS-------ILEKKERGKLN---------DYAPNPTVGP--MNKLVNAYGGT 801
Fly 802 SDSEEDNAASSQNTQ----------SSAVVSGGGGAEESDYVDFHKLTCLLCKRAFQSLEILQKH 856
Fly 857 LKMSTLHKENLAKLNQNTSSSIEEALAYRDRAKERRLKYGESDPPPPNRSRERFEQEIKTLQSRQ 921
Fly 922 KQSTSATPAMP------------------------ISSSNVGSRLLQKMGWSEGQGLGRKNQGRT 962
Fly 963 QIIEADGRSNYVGLGNKSG------QMIPGNDYKSYIKKMMKQRYEN 1003 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4887 | NP_001259859.1 | DUF1777 | 115..>196 | CDD:285811 | 28/90 (31%) |
RRM_SF | 255..335 | CDD:302621 | 24/81 (30%) | ||
ZnF_RBZ | 341..364 | CDD:197784 | 12/25 (48%) | ||
RanBP2-type Zn finger | 342..361 | CDD:275375 | 9/18 (50%) | ||
RRM1_RRM2_RBM5_like | 387..473 | CDD:240759 | 20/87 (23%) | ||
OCRE_RBM5_like | 623..678 | CDD:293881 | 20/54 (37%) | ||
OCRE repeat 1 | 628..635 | CDD:293881 | 2/6 (33%) | ||
OCRE repeat 2 | 636..643 | CDD:293881 | 6/6 (100%) | ||
OCRE repeat 3 | 644..651 | CDD:293881 | 3/6 (50%) | ||
OCRE repeat 4 | 652..659 | CDD:293881 | 3/6 (50%) | ||
OCRE repeat 5 | 661..668 | CDD:293881 | 1/6 (17%) | ||
G-patch | 935..979 | CDD:279867 | 20/43 (47%) | ||
SUA | NP_001190084.1 | PHA02896 | <74..>219 | CDD:165222 | 42/149 (28%) |
RRM1_RRM2_RBM5_like | 270..350 | CDD:240759 | 24/83 (29%) | ||
ZnF_RBZ | 382..405 | CDD:197784 | 11/22 (50%) | ||
RanBP2-type Zn finger | 383..402 | CDD:275376 | 9/18 (50%) | ||
RRM1_RRM2_RBM5_like | 431..511 | CDD:240759 | 26/116 (22%) | ||
OCRE_SUA_like | 579..631 | CDD:293885 | 23/63 (37%) | ||
OCRE repeat 1 | 583..590 | CDD:293885 | 2/18 (11%) | ||
OCRE repeat 2 | 591..598 | CDD:293885 | 6/6 (100%) | ||
OCRE repeat 3 | 599..606 | CDD:293885 | 3/6 (50%) | ||
OCRE repeat 4 | 607..614 | CDD:293885 | 3/6 (50%) | ||
OCRE repeat 5 | 616..623 | CDD:293885 | 1/6 (17%) | ||
G_patch | 927..971 | CDD:197727 | 19/43 (44%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 49 | 1.000 | Domainoid score | I4422 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0154 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 183 | 1.000 | Inparanoid score | I1429 |
OMA | 1 | 1.010 | - | - | QHG55750 | |
OrthoDB | 1 | 1.010 | - | - | D786674at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002462 | |
OrthoInspector | 1 | 1.000 | - | - | otm3230 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102541 | |
Panther | 1 | 1.100 | - | - | O | PTHR13948 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1642 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.840 |