Sequence 1: | NP_001259859.1 | Gene: | CG4887 / 33304 | FlyBaseID: | FBgn0031318 | Length: | 1004 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_024308225.1 | Gene: | RBM10 / 8241 | HGNCID: | 9896 | Length: | 1029 | Species: | Homo sapiens |
Alignment Length: | 1148 | Identity: | 328/1148 - (28%) |
---|---|---|---|
Similarity: | 480/1148 - (41%) | Gaps: | 322/1148 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 SSSRRSFSGGS-ENEGGRGSDYYRSRPGSRYSRSRSRSRERNRSHGGIRHRNSRSRSRDRDRSPV 66
Fly 67 FRNDQHRGGRGGAGNGDPDLYHSLINDDYRDQDERNYNSRSNFENRQFRRHDSFDRRHRDRDGES 131
Fly 132 DRELNDYEYEQRSRDLDSRDRSSTDRDWYHNRSRSREHSRPWNRNNNHDDRSRSNERNTRHRDHR 196
Fly 197 MYNGGGSNHNRD---RDRDRDREQDRERDRDRDRDRERRGSSDYDSDEGHMRRNKYRSTTEALNI 258
Fly 259 IIIFGLTKEMTRADIMSELIKVNMEPACIRIIRKQGTDSSRGIAFVEFNTVEEAKQWMDITQGVL 323
Fly 324 KLNDERVSMRYSH---KRIQDWNCNKCGVCNFKFRFYCFVCKTSREDSETTFSSG---------- 375
Fly 376 ---------------------------SEGVDEVSTILTKKIMLRNLDALTNEEAVLTALQLHLK 413
Fly 414 DLSKTVSKVLISRDSLTQASRGICYLHFDTLVDSMNVHNALTALDPPLTLDDRVVAITYCIDLEE 478
Fly 479 QQALPKNPKELAVKDSTVNSGNIS----AVSPSGLGGNYTLA---DVPRLAEYS----------- 525
Fly 526 ----ASLYAS---------------------------NPAEHAYYVQYYTE--------YYTADI 551
Fly 552 NKNNRDSHLTEANSGAAVALSAIQRKQKKMSSI----------------ETTITAAATAAAQAAA 600
Fly 601 QVKATLAAQVASAPKGNDG-KIYPTPDVTQYQYDETSGYYYDSTTGLYYNAHSQYYYNNETGAYL 664
Fly 665 YWDQRRSTYVLATPASTQAALQEVLADAEQKGEEESKKAKEKEGGNKHDKVKVAKKIVKDMEKWA 729
Fly 730 KQLNQKKD-----YTAVATPQPILANEVATTSRGNQGGYADVGFSILEKK----ER-------GK 778
Fly 779 L-NDYAPNPTVGPMNKLVNAYGGTSDSEEDNAASSQNTQSSAVVSGGGGAEESDYVDFHKLTCLL 842
Fly 843 CKRAFQSLEILQKHLKMSTLHKENL-----AKLNQNTSSSIE----EALAYRDRAKERRLKYGES 898
Fly 899 DPPPPNRSRERFEQEIKTLQSRQKQSTSATPAMPISSSNVGSRLLQKMGWSEGQGLGRKNQGRTQ 963
Fly 964 IIEADGRSNYVGLGNKSGQ--MIPGNDYKSYIKKMMKQRYENA 1004 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4887 | NP_001259859.1 | DUF1777 | 115..>196 | CDD:285811 | 10/80 (13%) |
RRM_SF | 255..335 | CDD:302621 | 25/79 (32%) | ||
ZnF_RBZ | 341..364 | CDD:197784 | 15/22 (68%) | ||
RanBP2-type Zn finger | 342..361 | CDD:275375 | 13/18 (72%) | ||
RRM1_RRM2_RBM5_like | 387..473 | CDD:240759 | 27/85 (32%) | ||
OCRE_RBM5_like | 623..678 | CDD:293881 | 36/54 (67%) | ||
OCRE repeat 1 | 628..635 | CDD:293881 | 4/6 (67%) | ||
OCRE repeat 2 | 636..643 | CDD:293881 | 6/6 (100%) | ||
OCRE repeat 3 | 644..651 | CDD:293881 | 5/6 (83%) | ||
OCRE repeat 4 | 652..659 | CDD:293881 | 6/6 (100%) | ||
OCRE repeat 5 | 661..668 | CDD:293881 | 4/6 (67%) | ||
G-patch | 935..979 | CDD:279867 | 26/43 (60%) | ||
RBM10 | XP_024308225.1 | RRM | 86..>297 | CDD:223796 | 78/320 (24%) |
RRM1_RBM10 | 192..276 | CDD:241197 | 28/105 (27%) | ||
ZnF_RBZ | 280..304 | CDD:197784 | 15/23 (65%) | ||
RanBP2-type Zn finger | 282..301 | CDD:275376 | 13/18 (72%) | ||
RRM2_RBM10 | 363..449 | CDD:241198 | 27/88 (31%) | ||
OCRE_RBM10 | 663..726 | CDD:293886 | 42/71 (59%) | ||
OCRE repeat 1 | 669..676 | CDD:293886 | 4/6 (67%) | ||
OCRE repeat 2 | 677..684 | CDD:293886 | 6/6 (100%) | ||
OCRE repeat 3 | 685..692 | CDD:293886 | 5/6 (83%) | ||
OCRE repeat 4 | 693..700 | CDD:293886 | 6/6 (100%) | ||
OCRE repeat 5 | 702..709 | CDD:293886 | 4/6 (67%) | ||
G-patch | 957..1001 | CDD:307632 | 26/43 (60%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165152937 | |
Domainoid | 1 | 1.000 | 124 | 1.000 | Domainoid score | I5526 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0154 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H31330 | |
Inparanoid | 1 | 1.050 | 371 | 1.000 | Inparanoid score | I2130 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S6718 |
OMA | 1 | 1.010 | - | - | QHG55750 | |
OrthoDB | 1 | 1.010 | - | - | D786674at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002462 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8631 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102541 | |
Panther | 1 | 1.100 | - | - | O | PTHR13948 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1642 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.720 |