DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4887 and Gpatch2

DIOPT Version :10

Sequence 1:NP_608582.2 Gene:CG4887 / 33304 FlyBaseID:FBgn0031318 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_080643.4 Gene:Gpatch2 / 67769 MGIID:1915019 Length:527 Species:Mus musculus


Alignment Length:457 Identity:97/457 - (21%)
Similarity:155/457 - (33%) Gaps:165/457 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   668 QRRSTYVLATPASTQAALQEVLADAEQKGEEESKKAKEKEGGNKHDK------VKVAKK------ 720
            ::|.:|.:..|..|...|.|   .::...||.||..:||...||.|:      :.|||:      
Mouse    70 RKRRSYNVHHPWETGHCLSE---GSDSSLEEPSKDYREKHSNNKKDRSDSDDQMLVAKRRPSSNL 131

  Fly   721 ----------------IVKDMEKWAKQLNQKKDYTAVATPQPILANEVAT------------TSR 757
                            .|..:.....:..:|....||..||.:.:....|            ..|
Mouse   132 SSSVRGKRLLWHESDFAVDSLGNRTLRRRRKVKRMAVDLPQDVSSKRTMTQLPEGCRDQDMDNDR 196

  Fly   758 GNQGGYADVGFSILEKKERGKLNDYAPNPTVGPMNKLVNAYGGTSDSEE---------------- 806
            .:|  |.:  |:..:.|:| ||....|.|.       ....||..:|||                
Mouse   197 ASQ--YPE--FTRKKVKKR-KLKGIRPGPK-------TQEEGGVLESEERSQPNKDRMEYEEQKA 249

  Fly   807 -DNAASSQNTQSSAVVSGG---------GGAEESDYVDFH-----------------------KL 838
             |...|..:|.|.:....|         |..|:||:  |:                       :|
Mouse   250 SDELRSESDTSSLSSTDAGLFTNDEGRQGDDEQSDW--FYEKESGGACGIAGVVPWWEKDEPAEL 312

  Fly   839 TCLLCKRAFQSLEI----LQKH-------LKMSTLH---KENLAK--------LNQNTSSSIEEA 881
            ...|....|:|:..    |..|       .::|.||   .:|:.|        |:.....|.:..
Mouse   313 DTNLPDPVFESILSGSFPLMSHPGRGGFQARLSRLHGTPSKNIKKSSGAPPSMLSAPGPGSNKRM 377

  Fly   882 LAYRDRAKER--------RLKYGESDPPPPNRSRERFEQEIKTLQSRQKQST------------- 925
            :.:...|...        |.::|:......||: ||..::..:|::..:|::             
Mouse   378 VHFSPDAHRHDHWFSPGARTEHGQHQLLRDNRA-ERGHKKSCSLKTASRQTSMHLGSLCTGDIKR 441

  Fly   926 --SATP-------------AMPISSSNVGSRLLQKMGWSEGQGLGRKNQGRTQIIEADGRSNYVG 975
              .|.|             |.||..||:|:|:||.|||:.|.||||..:|..:.::|..|...:|
Mouse   442 RRKAAPLPGPTAAGIVGENAQPILESNIGNRMLQSMGWTPGSGLGRDGRGIAEPVQAVQRPKGLG 506

  Fly   976 LG 977
            ||
Mouse   507 LG 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4887NP_608582.2 U2AF_lg 93..>193 CDD:273727
RRM_SF 255..335 CDD:473069
ZnF_RBZ 341..364 CDD:197784
RanBP2-type Zn finger 342..361 CDD:275377
RRM1_RRM2_RBM5_like 387..473 CDD:409752
OCRE_RBM5_like 623..678 CDD:293881 2/9 (22%)
OCRE repeat 1 628..635 CDD:293881
OCRE repeat 2 636..643 CDD:293881
OCRE repeat 3 644..651 CDD:293881
OCRE repeat 4 652..659 CDD:293881
OCRE repeat 5 661..668 CDD:293881 97/457 (21%)
G-patch 935..979 CDD:396249 20/43 (47%)
Gpatch2NP_080643.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..135 18/67 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..281 22/117 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..375 4/24 (17%)
G-patch 467..508 CDD:396249 18/40 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 480..527 11/29 (38%)
Blue background indicates that the domain is not in the aligned region.

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