DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4887 and Aggf1

DIOPT Version :9

Sequence 1:NP_001259859.1 Gene:CG4887 / 33304 FlyBaseID:FBgn0031318 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_079906.2 Gene:Aggf1 / 66549 MGIID:1913799 Length:711 Species:Mus musculus


Alignment Length:805 Identity:156/805 - (19%)
Similarity:247/805 - (30%) Gaps:319/805 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 EDSETTFSSGSEGVDEVSTIL--TKKIMLRNLDALTNEEAVLTALQLHLKDLSKTVSKVLISRDS 428
            |..|....|....|.||..:|  |:: :.||.:: .|:|     |:..:::|||.:.        
Mouse    31 EKLERELRSCRRQVREVEKLLQHTER-LYRNAES-DNQE-----LRTQVEELSKILH-------- 80

  Fly   429 LTQASRGICYLHFDTLVDSMNVHNALTALDPPLTLDDRVVAITYCIDLEEQQALPKNPKELAVKD 493
                    |..:.|.....:.|.   |....|..:.|......|     ...:||....||.|:.
Mouse    81 --------CGKNEDNPKSDVEVQ---TESQAPWAISDYYYQTCY-----NDDSLPSKETELCVQQ 129

  Fly   494 STVNSGNISAVSPSGLGGNYTLADVPRLAEYSASLYASNPAEHAYYVQYYTEYYTADINKNNRDS 558
            |  .....||:.|..                                                :|
Mouse   130 S--QCAQASALDPQD------------------------------------------------ES 144

  Fly   559 HLTEANSGAAVALSAIQRKQKK--MSSIETTITAAATAAAQAAAQVKATL--AAQVASAPKGNDG 619
            |:...:...|.|...:..:|:.  .|..:.:::|.|...|...:.:..:|  ||:.|.:..|   
Mouse   145 HIDSGSYAGADATEGVSHRQEDAVTSDSQESVSALAEGPALEGSSLAESLRAAAEAAVSQTG--- 206

  Fly   620 KIYPTPDVTQYQYDETSGYYYDSTTGLYYNAHSQYYYNNETGAYLYWDQRRSTYVLATPASTQAA 684
                      :.|||::|.|:|.:||.||::.:|.||:..||.|.|.|.....|..    .::..
Mouse   207 ----------FTYDESTGLYFDHSTGFYYDSENQLYYDPSTGIYYYCDVESGRYQF----HSRVD 257

  Fly   685 LQEVLADAEQKGEEESKKAKEKEGGNKHDKVKVAKKIVKDMEKWAKQLNQKKDYTAVATPQPILA 749
            ||.....:.:...|...|.:.||.|                   ....|::||.:  :..|.:.:
Mouse   258 LQPYQTSSTKPNRERRLKKRRKEPG-------------------FYTANEEKDLS--SEDQKVCS 301

  Fly   750 NEVATTSRGNQGGYADVGFSILEKKERGKLNDYAPNPTVGPMNKLVNAYGGTSDSE-EDNAASSQ 813
            .|....|.....|.       ::||.|...:..:     .|:...|...|.|.:|. :||:|||:
Mouse   302 VEYINCSEDEHSGN-------VKKKARTDTSHKS-----SPLQLTVAVSGDTVESPGDDNSASSK 354

  Fly   814 -----------------NTQSSAVVSGGGG------AEESD------------------------ 831
                             ::||.....|...      :||||                        
Mouse   355 DERIGESESEPEEGEITDSQSEKSYDGDSSSGDRETSEESDDEDEERIWPPCIRVIVIRSPVLQM 419

  Fly   832 --------------------------------------YVD------------------------ 834
                                                  |.|                        
Mouse   420 GSLFIITAVSPATIGREKDMEHTVRIPEVAVSKFHAEVYFDHDLQSYVLVDQGSQNGTIVNGKQI 484

  Fly   835 --------------------------FH----KLTCLLCK----RAFQSLEILQKHLKMSTLHKE 865
                                      ||    ..||..|:    ||...|:...:.|....|.||
Mouse   485 LQPKTKCDPYVLEHGDEVKIGETVLSFHIHPGSETCDGCEPGQVRAHLRLDRKDEPLVGPALSKE 549

  Fly   866 N--------LAKLN-----QNTSSSIEEAL---AYRDRAKERRLKYGESDPPPPNRSRERFEQEI 914
            .        |.|:.     |||....|:||   .|:|||.:||.:.|         |...|    
Mouse   550 EKELERRKALKKIRVKYGLQNTDYEAEKALKNPKYKDRAGKRREQVG---------SEGTF---- 601

  Fly   915 KTLQSRQKQSTSATPAMPISSSNVGSRLLQKMGWSEGQGLGRKNQGRTQIIEADGRSNYVGLGNK 979
                  |:....|:....|:.||.|.::|:||||..|:|||:...|....|:...|..:.|||  
Mouse   602 ------QRDDAPASVHSEITDSNKGRKMLEKMGWKRGEGLGKDGGGMKTPIQLQLRRTHAGLG-- 658

  Fly   980 SGQMIPGNDYKSYIKKMMKQRYENA 1004
            :|::...:|. ..|:...|:.::.|
Mouse   659 TGKLSSIDDV-HLIQNKSKKHWDKA 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4887NP_001259859.1 DUF1777 115..>196 CDD:285811
RRM_SF 255..335 CDD:302621
ZnF_RBZ 341..364 CDD:197784
RanBP2-type Zn finger 342..361 CDD:275375
RRM1_RRM2_RBM5_like 387..473 CDD:240759 15/85 (18%)
OCRE_RBM5_like 623..678 CDD:293881 19/54 (35%)
OCRE repeat 1 628..635 CDD:293881 2/6 (33%)
OCRE repeat 2 636..643 CDD:293881 3/6 (50%)
OCRE repeat 3 644..651 CDD:293881 4/6 (67%)
OCRE repeat 4 652..659 CDD:293881 3/6 (50%)
OCRE repeat 5 661..668 CDD:293881 3/6 (50%)
G-patch 935..979 CDD:279867 18/43 (42%)
Aggf1NP_079906.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 137..184 10/94 (11%)
OCRE_VG5Q 200..253 CDD:293883 21/69 (30%)
OCRE repeat 1 205..212 CDD:293883 3/19 (16%)
OCRE repeat 2 213..220 CDD:293883 3/6 (50%)
OCRE repeat 3 221..228 CDD:293883 4/6 (67%)
OCRE repeat 4 229..235 CDD:293883 3/5 (60%)
OCRE repeat 5 238..245 CDD:293883 3/6 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..297 8/57 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 311..400 21/100 (21%)
FHA 407..513 CDD:238017 3/105 (3%)
FHA <424..509 CDD:224630 2/84 (2%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 579..623 16/62 (26%)
G-patch 617..658 CDD:279867 16/40 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 690..711
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0154
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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