DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4887 and GPATCH2L

DIOPT Version :9

Sequence 1:NP_001259859.1 Gene:CG4887 / 33304 FlyBaseID:FBgn0031318 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_016876916.1 Gene:GPATCH2L / 55668 HGNCID:20210 Length:495 Species:Homo sapiens


Alignment Length:501 Identity:90/501 - (17%)
Similarity:162/501 - (32%) Gaps:132/501 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 QDRERDRDRDRDRERRGSSDYDSDEGHMRRNK--YRSTTEALNIIIIFGLTKE------MTRADI 273
            |.|.:.|.| |.|:||      ||..|:..:.  |...:|:    .:...||:      :|....
Human    47 QQRRQLRKR-RGRKRR------SDFTHLAEHTCCYSEASES----SLDEATKDCREVAPVTNFSD 100

  Fly   274 MSELIKVNMEPACIRIIRKQGTDSSRGIAFVEFNTVEEAKQWMDITQGVLKLNDERVSMRYSHKR 338
            ..:.:.....||...|::.:........:|.|.......::    .:.|.::..|..:......:
Human   101 SDDTMVAKRHPALNAIVKSKQHSWHESDSFTENAPCRPLRR----RRKVKRVTSEVAASLQQKLK 161

  Fly   339 IQDWNCNKCGVCNFKFRFYCFVCKTSREDSETTFSSGSEGVDEVS---TILTKKIMLRNLDALTN 400
            :.||:..:  .|.||   .....:.||....|.::|...|:.|.:   |.|:|......::..|:
Human   162 VSDWSYER--GCRFK---SAKKQRLSRWKENTPWTSSGHGLCESAENRTFLSKTGRKERMECETD 221

  Fly   401 EEAVLTALQLHLKDLSKTVSKV---LISRDSLTQAS--------RGICYLHFDTLVDSMNVHNAL 454
            |:...:...:...:.|...|..   |.:.|...|..        .|.|       |....|.|.|
Human   222 EQKQGSDENMSECETSSVCSSSDTGLFTNDEGRQGDDEQSDWFYEGEC-------VPGFTVPNLL 279

  Fly   455 TALDPPLTLDDRVVAITYCIDLEEQQA-----------LPKNP---------------------- 486
            ....|           .:|.::|...:           ||..|                      
Human   280 PKWAP-----------DHCSEVERMDSGLDKFSDSTFLLPSRPAQRGYHTRLNRLPGAAARCLRK 333

  Fly   487 --KELAVKDSTVNSGNISAVS-----PSGLGGNYTLA-DVPRLAEYSASLYASNPAEHAYYVQYY 543
              :.|..|::::|:.....:|     |.....|..|| |.|.:   ||..:..||         .
Human   334 GRRRLVGKETSINTLGTERISHIISDPRQKEKNKALASDFPHI---SACAHEFNP---------L 386

  Fly   544 TEYYTADINKNNRDSHLTEANSGAAVA--------LSAIQRKQKKM--------SSIETTITAAA 592
            :..|:.|:..:......:.|:..|..|        ...|:||:|.:        |::........
Human   387 SPLYSLDVLADASHRRCSPAHCSARQANVHWGPPCSRDIKRKRKPVATASLSSPSAVHMDAVEPT 451

  Fly   593 TAAAQAAAQVKATLAAQVASAPKGNDGKIYPTPDVTQYQYDETSGY 638
            |.|:||.....:....:.::|.|..|.   .|....:...:::.||
Human   452 TPASQAPKSPSSEWLVRTSAAEKATDA---TTATFFKMPQEKSPGY 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4887NP_001259859.1 DUF1777 115..>196 CDD:285811
RRM_SF 255..335 CDD:302621 10/85 (12%)
ZnF_RBZ 341..364 CDD:197784 5/22 (23%)
RanBP2-type Zn finger 342..361 CDD:275375 4/18 (22%)
RRM1_RRM2_RBM5_like 387..473 CDD:240759 15/96 (16%)
OCRE_RBM5_like 623..678 CDD:293881 3/16 (19%)
OCRE repeat 1 628..635 CDD:293881 0/6 (0%)
OCRE repeat 2 636..643 CDD:293881 2/3 (67%)
OCRE repeat 3 644..651 CDD:293881
OCRE repeat 4 652..659 CDD:293881
OCRE repeat 5 661..668 CDD:293881
G-patch 935..979 CDD:279867
GPATCH2LXP_016876916.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0154
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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