Sequence 1: | NP_001259859.1 | Gene: | CG4887 / 33304 | FlyBaseID: | FBgn0031318 | Length: | 1004 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016876916.1 | Gene: | GPATCH2L / 55668 | HGNCID: | 20210 | Length: | 495 | Species: | Homo sapiens |
Alignment Length: | 501 | Identity: | 90/501 - (17%) |
---|---|---|---|
Similarity: | 162/501 - (32%) | Gaps: | 132/501 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 217 QDRERDRDRDRDRERRGSSDYDSDEGHMRRNK--YRSTTEALNIIIIFGLTKE------MTRADI 273
Fly 274 MSELIKVNMEPACIRIIRKQGTDSSRGIAFVEFNTVEEAKQWMDITQGVLKLNDERVSMRYSHKR 338
Fly 339 IQDWNCNKCGVCNFKFRFYCFVCKTSREDSETTFSSGSEGVDEVS---TILTKKIMLRNLDALTN 400
Fly 401 EEAVLTALQLHLKDLSKTVSKV---LISRDSLTQAS--------RGICYLHFDTLVDSMNVHNAL 454
Fly 455 TALDPPLTLDDRVVAITYCIDLEEQQA-----------LPKNP---------------------- 486
Fly 487 --KELAVKDSTVNSGNISAVS-----PSGLGGNYTLA-DVPRLAEYSASLYASNPAEHAYYVQYY 543
Fly 544 TEYYTADINKNNRDSHLTEANSGAAVA--------LSAIQRKQKKM--------SSIETTITAAA 592
Fly 593 TAAAQAAAQVKATLAAQVASAPKGNDGKIYPTPDVTQYQYDETSGY 638 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4887 | NP_001259859.1 | DUF1777 | 115..>196 | CDD:285811 | |
RRM_SF | 255..335 | CDD:302621 | 10/85 (12%) | ||
ZnF_RBZ | 341..364 | CDD:197784 | 5/22 (23%) | ||
RanBP2-type Zn finger | 342..361 | CDD:275375 | 4/18 (22%) | ||
RRM1_RRM2_RBM5_like | 387..473 | CDD:240759 | 15/96 (16%) | ||
OCRE_RBM5_like | 623..678 | CDD:293881 | 3/16 (19%) | ||
OCRE repeat 1 | 628..635 | CDD:293881 | 0/6 (0%) | ||
OCRE repeat 2 | 636..643 | CDD:293881 | 2/3 (67%) | ||
OCRE repeat 3 | 644..651 | CDD:293881 | |||
OCRE repeat 4 | 652..659 | CDD:293881 | |||
OCRE repeat 5 | 661..668 | CDD:293881 | |||
G-patch | 935..979 | CDD:279867 | |||
GPATCH2L | XP_016876916.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0154 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |