DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4887 and AGGF1

DIOPT Version :10

Sequence 1:NP_608582.2 Gene:CG4887 / 33304 FlyBaseID:FBgn0031318 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_060516.2 Gene:AGGF1 / 55109 HGNCID:24684 Length:714 Species:Homo sapiens


Alignment Length:759 Identity:150/759 - (19%)
Similarity:260/759 - (34%) Gaps:274/759 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 EDSETTFSSGSEGVDEVSTIL--TKKIMLRNLDALTNEEAVLTALQLHLKDLSKTV--------- 419
            |..|....|....|.|:..:|  |:: :.:|.:: .|:|     |:..:::|||.:         
Human    30 EKLERELRSCKRQVREIEKLLHHTER-LYQNAES-NNQE-----LRTQVEELSKILQRGRNEDNK 87

  Fly   420 -SKVLISRDSLTQASRGICYLHFDTLVDSMNVHNALTALDPPLTLDDRVVAITYCIDLEEQQALP 483
             |.|.:..::  .|...|....:.|..:.:::.|.:|                   :|.:||   
Human    88 KSDVEVQTEN--HAPWSISDYFYQTYYNDVSLPNKVT-------------------ELSDQQ--- 128

  Fly   484 KNPKELAVKDSTVNSGNISAVSPSGLGGNYTLADVP-RLAEYSASLYASNPAEHAYYVQYYTEYY 547
                :.|::.|.:||.:...|......|.....:|. |..::    :|||..|.|          
Human   129 ----DQAIETSILNSKDHLQVENDAYPGTDRTENVKYRQVDH----FASNSQEPA---------- 175

  Fly   548 TADINKNNRDSHLTEANSGAAVALSAIQRKQKKM--SSIETTITAAATAAAQAAAQVKATLAAQV 610
                                    ||:..:...:  ||:..::.|||.||...            
Human   176 ------------------------SALATEDTSLEGSSLAESLRAAAEAAVSQ------------ 204

  Fly   611 ASAPKGNDGKIYPTPDVTQYQYDETSGYYYDSTTGLYYNAHSQYYYNNETGAYLYWDQRRSTY-- 673
                             |.:.|||.:|.|:|.:||.||::.:|.||:..||.|.|.|.....|  
Human   205 -----------------TGFSYDENTGLYFDHSTGFYYDSENQLYYDPSTGIYYYCDVESGRYQF 252

  Fly   674 ---VLATPASTQAALQEVLADAEQKGEE-ESKKAKEKEGGNKHDKVKVA--------KKIVKDME 726
               |...|..|.:..|......::|.:: :|....|::..|..|:...:        ::...:|:
Human   253 HSRVDLQPYPTSSTKQSKDKKLKKKRKDPDSSATNEEKDLNSEDQKAFSVEHTSCNEEENFANMK 317

  Fly   727 KWAK-QLNQKKDYTAVATP-------QPILANEVATTSRGNQGGYADVGFSILE---KKERGKLN 780
            |.|| .::.|.....|..|       .|:..|...:||..::        .|:|   :.|.|::.
Human   318 KKAKIGIHHKNSPPKVTVPTSGNTIESPLHENISNSTSFKDE--------KIMETDSEPEEGEIT 374

  Fly   781 DYAPNPTVGPMNKLVNAYGG-----TSDSEED----------------------------NAAS- 811
            |   :.|....::.:.:.|.     :.|.:||                            |.|: 
Human   375 D---SQTEDSYDEAITSEGNVTAEDSEDEDEDKIWPPCIRVIVIRSPVLQIGSLFIITAVNPATI 436

  Fly   812 ------------------------------------SQNTQSSAVVSG----------------- 823
                                                .|.:|:..:|:|                 
Human   437 GREKDMEHTLRIPEVGVSKFHAEIYFDHDLQSYVLVDQGSQNGTIVNGKQILQPKTKCDPYVLEH 501

  Fly   824 GGGAEESDYV-DFH----KLTCLLCK----RAFQSLEILQKHLKMSTLHKENLAKLNQNTSSSIE 879
            |...:..:.| .||    ..||..|:    ||...|:...:.....||.||             |
Human   502 GDEVKIGETVLSFHIHPGSDTCDGCEPGQVRAHLRLDKKDESFVGPTLSKE-------------E 553

  Fly   880 EALAYRDRAKERRLKYG-----------ESDPPPPNRSRERFEQEIKTLQSRQKQSTSATPAMPI 933
            :.|..|...|:.|:|||           ..:|...:|:.:|.|| :.:..:.|:....|:....|
Human   554 KELERRKELKKIRVKYGLQNTEYEDEKTLKNPKYKDRAGKRREQ-VGSEGTFQRDDAPASVHSEI 617

  Fly   934 SSSNVGSRLLQKMGWSEGQGLGRKNQGRTQIIEADGRSNYVGLG 977
            :.||.|.::|:||||.:|:|||:...|....|:...|..:.|||
Human   618 TDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTHAGLG 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4887NP_608582.2 U2AF_lg 93..>193 CDD:273727
RRM_SF 255..335 CDD:473069
ZnF_RBZ 341..364 CDD:197784
RanBP2-type Zn finger 342..361 CDD:275377
RRM1_RRM2_RBM5_like 387..473 CDD:409752 15/95 (16%)
OCRE_RBM5_like 623..678 CDD:293881 21/59 (36%)
OCRE repeat 1 628..635 CDD:293881 3/6 (50%)
OCRE repeat 2 636..643 CDD:293881 3/6 (50%)
OCRE repeat 3 644..651 CDD:293881 4/6 (67%)
OCRE repeat 4 652..659 CDD:293881 3/6 (50%)
OCRE repeat 5 661..668 CDD:293881 3/6 (50%)
G-patch 935..979 CDD:396249 18/43 (42%)
AGGF1NP_060516.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
DUF745 <29..>79 CDD:398808 14/55 (25%)
OCRE_VG5Q 200..253 CDD:293883 22/81 (27%)
OCRE repeat 1 205..212 CDD:293883 3/6 (50%)
OCRE repeat 2 213..220 CDD:293883 3/6 (50%)
OCRE repeat 3 221..228 CDD:293883 4/6 (67%)
OCRE repeat 4 229..235 CDD:293883 3/5 (60%)
OCRE repeat 5 238..245 CDD:293883 3/6 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..307 8/47 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..384 13/72 (18%)
FHA_AGGF1 406..529 CDD:438738 13/122 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 586..617 6/31 (19%)
G-patch 620..661 CDD:396249 16/40 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 655..714 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.

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