DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4887 and GPATCH2

DIOPT Version :10

Sequence 1:NP_608582.2 Gene:CG4887 / 33304 FlyBaseID:FBgn0031318 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_011507991.1 Gene:GPATCH2 / 55105 HGNCID:25499 Length:551 Species:Homo sapiens


Alignment Length:321 Identity:82/321 - (25%)
Similarity:122/321 - (38%) Gaps:74/321 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   679 ASTQAALQEVLADAEQKG-EEESKKAKEKEGGNKHDKVKVAKKIVKDMEKWAKQLNQKKDYTAV- 741
            :||.|.|  ...|..::| :|:|....|||.|.       |..|...:..|     :|:|.|.: 
Human   264 SSTDAGL--FTNDEGRQGDDEQSDWFYEKESGG-------ACGITGVVPWW-----EKEDPTELD 314

  Fly   742 -ATPQPILANEVATTS---------RGNQGGYADV-GFSILE-KKERGKLNDYAPNPTVGPM-NK 793
             ..|.|:. ..:.|.|         ||.|...:.: |.|... ||..|......|.|  ||: ||
Human   315 KNVPDPVF-ESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSGGTPTSMVPIP--GPVGNK 376

  Fly   794 LVNAYGGTSDSEEDNAASSQNTQSSAVVSGGGGAEESDYVDFHKLTCLLCKRAFQSLEILQKHLK 858
            .:..:...|...:...:....|:.                |.|:|  |...||.:.         
Human   377 RMVHFSPDSHHHDHWFSPGARTEH----------------DQHQL--LRDNRAERG--------- 414

  Fly   859 MSTLHKENLAKLNQNTSSSIEEALAYRDRAKERRLKYGESDP-PPPNR----SRERFEQEIKTL- 917
                ||:|.:....:..:|:..........|.||    ::.| |.|..    |....|..:.:| 
Human   415 ----HKKNCSVRTASRQTSMHLGSLCTGDIKRRR----KAAPLPGPTTAGTCSHILDETHVISLA 471

  Fly   918 -QSRQKQSTSATPAMPISSSNVGSRLLQKMGWSEGQGLGRKNQGRTQIIEADGRSNYVGLG 977
             |...|.......|.||..:|:|:|:||.|||:.|.||||..:|.::.|:|..|...:|||
Human   472 IQIFHKAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4887NP_608582.2 U2AF_lg 93..>193 CDD:273727
RRM_SF 255..335 CDD:473069
ZnF_RBZ 341..364 CDD:197784
RanBP2-type Zn finger 342..361 CDD:275377
RRM1_RRM2_RBM5_like 387..473 CDD:409752
OCRE_RBM5_like 623..678 CDD:293881
OCRE repeat 1 628..635 CDD:293881
OCRE repeat 2 636..643 CDD:293881
OCRE repeat 3 644..651 CDD:293881
OCRE repeat 4 652..659 CDD:293881
OCRE repeat 5 661..668 CDD:293881
G-patch 935..979 CDD:396249 20/43 (47%)
GPATCH2XP_011507991.1 G-patch 491..532 CDD:396249 18/40 (45%)
Blue background indicates that the domain is not in the aligned region.

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