Sequence 1: | NP_001259859.1 | Gene: | CG4887 / 33304 | FlyBaseID: | FBgn0031318 | Length: | 1004 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001093608.3 | Gene: | rbm5 / 324302 | ZFINID: | ZDB-GENE-030131-3022 | Length: | 835 | Species: | Danio rerio |
Alignment Length: | 899 | Identity: | 276/899 - (30%) |
---|---|---|---|
Similarity: | 426/899 - (47%) | Gaps: | 136/899 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 164 SRSREHSRPWNRNNNHDDRSRSNERNTRHRDHRMYNGGGSNHNRDRDR------------DRDRE 216
Fly 217 QDRERDRDR-DRDRERR---GSSDYDSDEGHMRRNKYR---STTEALNIIIIFGLTKEMTRADIM 274
Fly 275 SEL-IKVNMEPACIRIIRKQGTDSSRGIAFVEFNTVEEAKQWMDITQGVLKLNDERVSMRYSHKR 338
Fly 339 --IQDWNCNKCGVCNFKFRFYCFVCKTSREDSETTFSSGSEGVDEVSTILTKKIMLRNLDALTNE 401
Fly 402 EAVLTALQLHLKDLSKTVSKVLISRDSLTQASRGICYLHFDTLVDSMNVHNALTALDPPLTLDDR 466
Fly 467 VVAITYCIDLEEQQALPKNPK--ELAVKDSTVNSGNISAVSPSGLGGNYTLADVPRLAEYSASLY 529
Fly 530 ASNPAEHAYYVQYYTEYYTADINKNN------RDSHLTEANSGAAVALSAIQRKQKKMSSIE--- 585
Fly 586 TTITAAATAAAQAAAQVKATLAAQVASAPKGNDGKIYPTPDVTQYQYDETSGYYYDSTTGLYYNA 650
Fly 651 HSQYYYNNETGAYLYWDQRRSTYVLATPASTQAALQEVLADAEQKGEEESKKAKEKEGGNKHDKV 715
Fly 716 KVAKKIVKDMEKWAKQLNQKKDYTAVATPQPILANEVATTSRGNQGGYADVGFSILEKK------ 774
Fly 775 ---ERGKL-NDYAPNPTVGPMNKLVNAYGGTSDSEEDNAASSQNTQSSAVVSGGGGAEESDYVDF 835
Fly 836 HKLTCLLCKRAFQSLEILQKHLKMSTLHKENL-----AKLNQNTSSSIEE---ALAYRDRAKERR 892
Fly 893 LKYGESDPPPPNRSRERFEQEIKTLQSRQKQSTSATPAM--------PISSSNVGSRLLQKMGWS 949
Fly 950 EGQGLGRKNQGRTQIIEADGRSNYVGLGNK--SGQMIPGNDYKSYIKKMMKQRY 1001 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4887 | NP_001259859.1 | DUF1777 | 115..>196 | CDD:285811 | 10/31 (32%) |
RRM_SF | 255..335 | CDD:302621 | 24/80 (30%) | ||
ZnF_RBZ | 341..364 | CDD:197784 | 12/22 (55%) | ||
RanBP2-type Zn finger | 342..361 | CDD:275375 | 10/18 (56%) | ||
RRM1_RRM2_RBM5_like | 387..473 | CDD:240759 | 22/85 (26%) | ||
OCRE_RBM5_like | 623..678 | CDD:293881 | 31/54 (57%) | ||
OCRE repeat 1 | 628..635 | CDD:293881 | 4/6 (67%) | ||
OCRE repeat 2 | 636..643 | CDD:293881 | 6/6 (100%) | ||
OCRE repeat 3 | 644..651 | CDD:293881 | 5/6 (83%) | ||
OCRE repeat 4 | 652..659 | CDD:293881 | 5/6 (83%) | ||
OCRE repeat 5 | 661..668 | CDD:293881 | 4/6 (67%) | ||
G-patch | 935..979 | CDD:279867 | 24/43 (56%) | ||
rbm5 | NP_001093608.3 | RRM_SF | 110..196 | CDD:302621 | 26/86 (30%) |
zf-RanBP | 198..225 | CDD:279035 | 12/26 (46%) | ||
RanBP2-type Zn finger | 202..221 | CDD:275375 | 10/18 (56%) | ||
RRM2_RBM5 | 246..331 | CDD:241199 | 23/87 (26%) | ||
OCRE_RBM5 | 478..533 | CDD:293887 | 31/57 (54%) | ||
OCRE repeat 1 | 483..490 | CDD:293887 | 4/6 (67%) | ||
OCRE repeat 2 | 491..498 | CDD:293887 | 6/6 (100%) | ||
OCRE repeat 3 | 499..506 | CDD:293887 | 5/6 (83%) | ||
OCRE repeat 4 | 507..514 | CDD:293887 | 5/6 (83%) | ||
OCRE repeat 5 | 516..523 | CDD:293887 | 4/6 (67%) | ||
G-patch | 763..807 | CDD:279867 | 24/43 (56%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170587906 | |
Domainoid | 1 | 1.000 | 116 | 1.000 | Domainoid score | I5905 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 335 | 1.000 | Inparanoid score | I2382 |
OMA | 1 | 1.010 | - | - | QHG55750 | |
OrthoDB | 1 | 1.010 | - | - | D786674at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002462 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6537 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102541 | |
Panther | 1 | 1.100 | - | - | O | PTHR13948 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1642 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.910 |