Sequence 1: | NP_001259859.1 | Gene: | CG4887 / 33304 | FlyBaseID: | FBgn0031318 | Length: | 1004 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001128031.1 | Gene: | Gpatch2l / 314325 | RGDID: | 1308907 | Length: | 474 | Species: | Rattus norvegicus |
Alignment Length: | 230 | Identity: | 46/230 - (20%) |
---|---|---|---|
Similarity: | 78/230 - (33%) | Gaps: | 70/230 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 791 MNKLVNAYGGTSDSEE-----DNAASSQNTQSSAVVSGGGGAEESDYVDFHKLTCLLCKRAFQSL 850
Fly 851 EILQKHLKMSTLHKENLAKLNQNTSSSIEEALAYRDRA-----KERRLKYGESD------PPPPN 904
Fly 905 RSRER-----------FEQEIKT----------LQSRQKQSTSATPAMPISSSNVGSRLLQKMGW 948
Fly 949 -SEGQGLGRKNQGRTQI----------IEADGRSN 972 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4887 | NP_001259859.1 | DUF1777 | 115..>196 | CDD:285811 | |
RRM_SF | 255..335 | CDD:302621 | |||
ZnF_RBZ | 341..364 | CDD:197784 | |||
RanBP2-type Zn finger | 342..361 | CDD:275375 | |||
RRM1_RRM2_RBM5_like | 387..473 | CDD:240759 | |||
OCRE_RBM5_like | 623..678 | CDD:293881 | |||
OCRE repeat 1 | 628..635 | CDD:293881 | |||
OCRE repeat 2 | 636..643 | CDD:293881 | |||
OCRE repeat 3 | 644..651 | CDD:293881 | |||
OCRE repeat 4 | 652..659 | CDD:293881 | |||
OCRE repeat 5 | 661..668 | CDD:293881 | |||
G-patch | 935..979 | CDD:279867 | 12/49 (24%) | ||
Gpatch2l | NP_001128031.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0154 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |