Protein Alignment CG4887 and Gpatch2l

DIOPT Version :10

• Sequence 1: NP_608582.2
• Gene: CG4887 / 33304
• FlyBaseID: FBgn0031318
• Length: 1004
• Species: Drosophila melanogaster
• Sequence 2: NP_001128031.1
• Gene: Gpatch2l / 314325
• RGDID: 1308907
• Length: 474
• Species: Rattus norvegicus
• Alignment Length: 230
• Identity: 46/230 - (20%)
• Similarity: 78/230 - (33%)
• Gaps: 70/230 - (30%)

  Fly   791 MNKLVNAYGGTSDSEE-----DNAASSQNTQSSAVVSGGGGAEESDYVDFHKLTCLLCKRAFQSL 850
            ::.|.:|...||:..:     :..|.|...|...:....|....||:....:..|...:.:..||
  Rat     5 VHDLASALEQTSEQSKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEHACCFSEASESSL 69

  Fly   851 EILQKHLKMSTLHKENLAKLNQNTSSSIEEALAYRDRA-----KERRLKYGESD------PPPPN 904
            :...|..:       .:|.|. |.|.|.:..:|.|..|     :.::..:.|||      |..|.
  Rat    70 DEATKDCR-------EVAPLT-NFSDSDDTVVAKRHPALSAIVRGKQHSWHESDSFTENAPCRPL 126

  Fly   905 RSRER-----------FEQEIKT----------LQSRQKQSTSATPAMPISSSNVGSRLLQKMGW 948
            |.|.:           .:|::|.          .:|.:||..              ||..:...|
  Rat   127 RRRRKVKRVASEVAASLQQKLKVSDWSYERGCRFKSAKKQRL--------------SRWKENTPW 177

  Fly   949 -SEGQGLGRKNQGRTQI----------IEADGRSN 972
             |.|.||....:.||.:          .||:|:.:
  Rat   178 TSSGHGLCESAESRTFLSKTGRKERMECEAEGQKH 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4887	NP_608582.2	U2AF_lg	93..>193	CDD:273727
		RRM_SF	255..335	CDD:473069
		ZnF_RBZ	341..364	CDD:197784
		RanBP2-type Zn finger	342..361	CDD:275377
		RRM1_RRM2_RBM5_like	387..473	CDD:409752
		OCRE_RBM5_like	623..678	CDD:293881
		OCRE repeat 1	628..635	CDD:293881
		OCRE repeat 2	636..643	CDD:293881
		OCRE repeat 3	644..651	CDD:293881
		OCRE repeat 4	652..659	CDD:293881
		OCRE repeat 5	661..668	CDD:293881
		G-patch	935..979	CDD:396249	12/49 (24%)
Gpatch2l	NP_001128031.1	None