Sequence 1: | NP_001259859.1 | Gene: | CG4887 / 33304 | FlyBaseID: | FBgn0031318 | Length: | 1004 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038959383.1 | Gene: | Aggf1 / 310005 | RGDID: | 1310888 | Length: | 705 | Species: | Rattus norvegicus |
Alignment Length: | 638 | Identity: | 136/638 - (21%) |
---|---|---|---|
Similarity: | 222/638 - (34%) | Gaps: | 210/638 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 522 AEYSASLYASNPAEHAYYVQYYTEYYTADINKNNRDSHLTEANSGAAVALSAIQRKQKKMSSIET 586
Fly 587 TIT-------------------AAATAAAQAAAQVKATLAAQVASAPKGNDGKIYPTPDVTQYQY 632
Fly 633 DETSGYYYDSTTGLYYNAHSQYYYNNETGAYLYWDQRRSTYVLATPASTQAALQEVLADAEQKGE 697
Fly 698 EESKKAKEKEGG-----NKHDKVKVAKKIV--------KDMEKWAKQLNQKKDYTAVATPQPILA 749
Fly 750 NEVATTSRGNQGGYADVGFSILEKKER--------GKLND------YAPNPTVGPMNKLVNAYGG 800
Fly 801 TSDSEEDN-------------------------------------------------AAS----- 811
Fly 812 -------------SQNTQSSAVVSG-----------------GGGAEESDYV-DFH----KLTCL 841
Fly 842 LCK----RAFQSLEILQKHLKMSTLHKEN--------LAKLN-----QNTSSSIEEAL---AYRD 886
Fly 887 RAKERRLKYGESDPPPPNRSRERFEQEIKTLQSRQKQSTSATPAMPISSSNVGSRLLQKMGWSEG 951
Fly 952 QGLGRKNQGRTQIIEADGRSNYVGLGNKSGQMIPGNDYKSYIKKMMKQRYENA 1004 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4887 | NP_001259859.1 | DUF1777 | 115..>196 | CDD:285811 | |
RRM_SF | 255..335 | CDD:302621 | |||
ZnF_RBZ | 341..364 | CDD:197784 | |||
RanBP2-type Zn finger | 342..361 | CDD:275375 | |||
RRM1_RRM2_RBM5_like | 387..473 | CDD:240759 | |||
OCRE_RBM5_like | 623..678 | CDD:293881 | 20/54 (37%) | ||
OCRE repeat 1 | 628..635 | CDD:293881 | 3/6 (50%) | ||
OCRE repeat 2 | 636..643 | CDD:293881 | 3/6 (50%) | ||
OCRE repeat 3 | 644..651 | CDD:293881 | 4/6 (67%) | ||
OCRE repeat 4 | 652..659 | CDD:293881 | 3/6 (50%) | ||
OCRE repeat 5 | 661..668 | CDD:293881 | 3/6 (50%) | ||
G-patch | 935..979 | CDD:279867 | 18/43 (42%) | ||
Aggf1 | XP_038959383.1 | OCRE_VG5Q | 193..246 | CDD:293883 | 20/63 (32%) |
OCRE repeat 1 | 198..205 | CDD:293883 | 3/6 (50%) | ||
OCRE repeat 2 | 206..213 | CDD:293883 | 3/6 (50%) | ||
OCRE repeat 3 | 214..221 | CDD:293883 | 4/6 (67%) | ||
OCRE repeat 4 | 222..228 | CDD:293883 | 3/5 (60%) | ||
OCRE repeat 5 | 230..237 | CDD:293883 | 4/6 (67%) | ||
FHA | 401..507 | CDD:238017 | 9/105 (9%) | ||
G-patch | 611..652 | CDD:396249 | 16/40 (40%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |