DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4887 and GPATCH8

DIOPT Version :10

Sequence 1:NP_608582.2 Gene:CG4887 / 33304 FlyBaseID:FBgn0031318 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_011522859.1 Gene:GPATCH8 / 23131 HGNCID:29066 Length:1531 Species:Homo sapiens


Alignment Length:859 Identity:165/859 - (19%)
Similarity:254/859 - (29%) Gaps:346/859 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DSSSRRSF-----SGGSENEGGRGSDYYRSRPGSRYSRSRSRSRERNRSHGGIRHRNSRSRSRDR 61
            |.|.|||.     |.|.::|||.||.                    ::.|||.:|:.....|..:
Human   781 DDSQRRSLPAEEGSSGKKDEGGGGSS--------------------SQDHGGRKHKGELPPSSCQ 825

  Fly    62 DRSPVFRNDQ--HRGGRGGAGNGDPD------LYH---SLINDDYRDQDERNYNSRSNFENRQFR 115
            .|:...|:.:  || .:..:|:.|.|      |:.   |..:::..::|..:.:|||  .:|..|
Human   826 RRAGTKRSSRSSHR-SQPSSGDEDSDDASSHRLHQKSPSQYSEEEEEEDSGSEHSRS--RSRSGR 887

  Fly   116 RHDSFDRRHRDRDGESD-----------RELND---YEYEQRSRDLDSRDRSSTDRDWYHNRSRS 166
            ||.|.....|.....||           |..:|   .:|..|||....|...|.|.|:..::.||
Human   888 RHSSHRSSRRSYSSSSDASSDQSCYSRQRSYSDDSYSDYSDRSRRHSKRSHDSDDSDYASSKHRS 952

  Fly   167 REHSRPWNRNNNHDD------RSRSNER-NTRHRDHRMYNGGGSNHNRDRDRDRDREQ-----DR 219
            :.|    ..:::.||      :|||..| :||.|.........|:.:|.|.:.|.|..     .|
Human   953 KRH----KYSSSDDDYSLSCSQSRSRSRSHTRERSRSRGRSRSSSCSRSRSKRRSRSTTAHSWQR 1013

  Fly   220 ERDRDRDRDRERRGSSDYDSDEGHMRRNKYRSTTEALNIIIIFGLTKEMTRADIMSELIKVNMEP 284
            .|...|||.|..|..|   ...|..:|:....:.|          .:...|.|.:...|..:..|
Human  1014 SRSYSRDRSRSTRSPS---QRSGSRKRSWGHESPE----------ERHSGRRDFIRSKIYRSQSP 1065

  Fly   285 ACIRIIRKQG---TDSSRGIAFVEFNTVEEAKQWMDITQGVLKLNDERVSMRYSHKRIQDWNCNK 346
            ...|..|.:|   .|..||                         :|.:.:...|           
Human  1066 HYFRSGRGEGPGKKDDGRG-------------------------DDSKATGPPS----------- 1094

  Fly   347 CGVCNFKFRFYCFVCKTSREDSETTFSSGSEGVDEVSTILTKKIMLRNLDALTNEEAVLTALQLH 411
                               ::|......||||                 |....::..:||..| 
Human  1095 -------------------QNSNIGTGRGSEG-----------------DCSPEDKNSVTAKLL- 1122

  Fly   412 LKDLSKTVSKVLISRDSLTQASRGICYLHFDTLVDSMNVHNALTALDPPLTLDDRVVAITYCIDL 476
               |.|..|:.:..:.|::                                              
Human  1123 ---LEKIQSRKVERKPSVS---------------------------------------------- 1138

  Fly   477 EEQQALPK--NPKELAVKDSTVNSGNISAVSPSGLGGNYTLADVPRLAEYSASLYASNPAEHAYY 539
            ||.||.|.  .||   :||..  .|......|..||....|..:.:|           ||     
Human  1139 EEVQATPNKAGPK---LKDPP--QGYFGPKLPPSLGNKPVLPLIGKL-----------PA----- 1182

  Fly   540 VQYYTEYYTADINKNNRDSHLTEANSGAAVALSAIQRKQKKMSSIETTITAAATAAAQAAAQVKA 604
                    |...||...:              |.::|.:::..|                     
Human  1183 --------TRKPNKKCEE--------------SGLERGEEQEQS--------------------- 1204

  Fly   605 TLAAQVASAPKGNDGKIYPTPDVTQYQYDETSGYYYD-----STTG----------LYYNAHSQY 654
                :....|.|:...::.    .|:..:||:|...|     |.:|          |...|||..
Human  1205 ----ETEEGPPGSSDALFG----HQFPSEETTGPLLDPPPEESKSGEATADHPVAPLGTPAHSDC 1261

  Fly   655 YYNNETGAYLY------WDQRRSTYVLATPASTQAALQEVLADAEQ------------------- 694
            |..:.|.::.|      .|...|....:.|...:::|..:..|.|.                   
Human  1262 YPGDPTISHNYLPDPSDGDTLESLDSSSQPGPVESSLLPIAPDLEHFPSYAPPSGDPSIESTDGA 1326

  Fly   695 ---------------KGEEESKKAKEKEGGNKHDKVKVAKKIVKDMEKWAKQLNQKKDYTAVATP 744
                           ..||..|.:|.::...:|.:.::..|.||.....|.        .|.|||
Human  1327 EDASLAPLESQPITFTPEEMEKYSKLQQAAQQHIQQQLLAKQVKAFPASAA--------LAPATP 1383

  Fly   745 --QPILANEVATTS 756
              |||...:.||.|
Human  1384 ALQPIHIQQPATAS 1397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4887NP_608582.2 U2AF_lg 93..>193 CDD:273727 33/120 (28%)
RRM_SF 255..335 CDD:473069 11/82 (13%)
ZnF_RBZ 341..364 CDD:197784 0/22 (0%)
RanBP2-type Zn finger 342..361 CDD:275377 0/18 (0%)
RRM1_RRM2_RBM5_like 387..473 CDD:409752 8/85 (9%)
OCRE_RBM5_like 623..678 CDD:293881 16/75 (21%)
OCRE repeat 1 628..635 CDD:293881 1/6 (17%)
OCRE repeat 2 636..643 CDD:293881 2/11 (18%)
OCRE repeat 3 644..651 CDD:293881 2/16 (13%)
OCRE repeat 4 652..659 CDD:293881 2/6 (33%)
OCRE repeat 5 661..668 CDD:293881 1/12 (8%)
G-patch 935..979 CDD:396249
GPATCH8XP_011522859.1 G-patch 40..82 CDD:396249
zf-C2H2_jaz 136..163 CDD:432381
PTZ00449 <1085..1345 CDD:185628 60/428 (14%)
Blue background indicates that the domain is not in the aligned region.

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