Sequence 1: | NP_001259859.1 | Gene: | CG4887 / 33304 | FlyBaseID: | FBgn0031318 | Length: | 1004 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_035381.2 | Gene: | Rbm6 / 19654 | MGIID: | 1338037 | Length: | 1118 | Species: | Mus musculus |
Alignment Length: | 1245 | Identity: | 256/1245 - (20%) |
---|---|---|---|
Similarity: | 415/1245 - (33%) | Gaps: | 451/1245 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 SFSGGSEN------EGGRGSDY-YRSRPGSRYSRSRSRSRE------RNRS-HGGIRHRNSRSRS 58
Fly 59 RDRDRSPVFRNDQHRGGRGG----AGNGDPDLYHSLINDDYRDQDERNYNSRS-NFENRQFRRHD 118
Fly 119 SFDRRHRDRDG-ESD---RELNDYEYEQRSR-----------DLDSRDRSST------------- 155
Fly 156 ----DRDWYHNRSRSREHSRPWNRNNNHD----------------------------DRSRS--- 185
Fly 186 -NERNTRHRDHRM---------------------YNGGGSNHNRDRDRDRDREQDRERDRDRDRD 228
Fly 229 RERRGS------------------SDYDS------------------------DEGHMRRN---- 247
Fly 248 ----KYR---STTEALNIIIIFGLTKEMTRADIMSELIKVNMEPACIRIIRKQGTDSSRGIAFVE 305
Fly 306 FNTVEEAKQWMDITQGVLKLNDERVSMRYSHKRIQDWNCNKCGVCNFKFRFYCFVCKTSRE---- 366
Fly 367 -------------------------------------------------DSETTF-SSGSEGV-- 379
Fly 380 -----------DEVSTILTKKIMLRNLDALTNEEAVLTALQ--LHLKDLSKTVSKVLISRDSLTQ 431
Fly 432 ASRGICYLHFDTLVDSMNVHNALTALDPPLTLDDRVVAITYCIDLEEQQALPKNPKELAVKDSTV 496
Fly 497 NSGNISAVSPSGLGGNYTLADVPRLAEYSASLYASNPAEHAYYVQYYTEYYTADINKNNRDSHLT 561
Fly 562 EANSGAAVALSAIQRKQKKMSSIETTITAAATAAAQAAAQVKATLAAQVASAPKGNDGKIYPTPD 626
Fly 627 VTQYQYDETSGYYYDSTTGLYYNAHSQYYYNNETGAYLYWDQRRSTYVLATPASTQAALQEVLA- 690
Fly 691 -DAEQKGEEESKKAKEKEGGNKHDKVKVAKKIVKDMEKWAKQLNQKKDYTAVATP--QPILANEV 752
Fly 753 ATTSRGNQGGYADVGFSILEKKERGKLNDYAPNPTVGPMNKLVNAYGGTSDSEEDNAASSQNTQS 817
Fly 818 SAVVSGGGGA---------EESDYVDFHKLTCLLCKRAFQSLEILQKHLKMSTLHKENL---AKL 870
Fly 871 NQNTSSSIEEALAYRDRAKERRLKYGESDPPPPNRSRERFEQ----EIKTLQSRQKQSTSATPA- 930
Fly 931 -MPISSSNVGSRLLQKMGWSEGQGLGRKNQGRTQIIEADGRSNYVGLG--NKSGQMIPGNDYKSY 992
Fly 993 IKKMMKQRYE 1002 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4887 | NP_001259859.1 | DUF1777 | 115..>196 | CDD:285811 | 28/144 (19%) |
RRM_SF | 255..335 | CDD:302621 | 18/79 (23%) | ||
ZnF_RBZ | 341..364 | CDD:197784 | 6/22 (27%) | ||
RanBP2-type Zn finger | 342..361 | CDD:275375 | 4/18 (22%) | ||
RRM1_RRM2_RBM5_like | 387..473 | CDD:240759 | 22/87 (25%) | ||
OCRE_RBM5_like | 623..678 | CDD:293881 | 13/54 (24%) | ||
OCRE repeat 1 | 628..635 | CDD:293881 | 3/6 (50%) | ||
OCRE repeat 2 | 636..643 | CDD:293881 | 5/6 (83%) | ||
OCRE repeat 3 | 644..651 | CDD:293881 | 3/6 (50%) | ||
OCRE repeat 4 | 652..659 | CDD:293881 | 1/6 (17%) | ||
OCRE repeat 5 | 661..668 | CDD:293881 | 0/6 (0%) | ||
G-patch | 935..979 | CDD:279867 | 15/45 (33%) | ||
Rbm6 | NP_035381.2 | Pentapeptide_4 | 173..235 | CDD:404485 | 18/61 (30%) |
RRM1_RBM6 | 456..533 | CDD:409753 | 18/76 (24%) | ||
RRM2_RBM6 | 651..737 | CDD:409979 | 24/107 (22%) | ||
OCRE_RBM6 | 763..828 | CDD:293882 | 28/150 (19%) | ||
OCRE repeat 1 | 769..776 | CDD:293882 | 2/17 (12%) | ||
OCRE repeat 2 | 785..792 | CDD:293882 | 3/49 (6%) | ||
OCRE repeat 3 | 793..800 | CDD:293882 | 5/6 (83%) | ||
OCRE repeat 4 | 801..807 | CDD:293882 | 3/5 (60%) | ||
OCRE repeat 5 | 811..818 | CDD:293882 | 3/6 (50%) | ||
G-patch | 1046..>1079 | CDD:396249 | 11/32 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167843019 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0154 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D786674at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR13948 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
6 | 5.810 |