Protein Alignment CG4887 and LOC1275439

DIOPT Version :10

• Sequence 1: NP_608582.2
• Gene: CG4887 / 33304
• FlyBaseID: FBgn0031318
• Length: 1004
• Species: Drosophila melanogaster
• Sequence 2: XP_061509047.1
• Gene: LOC1275439 / 1275439
• VectorBaseID: AGAMI1_013777
• Length: 1084
• Species: Anopheles gambiae
• Alignment Length: 233
• Identity: 52/233 - (22%)
• Similarity: 88/233 - (37%)
• Gaps: 74/233 - (31%)

  Fly   267 DDEDNEFYDAQEEGGSVTQEDSSFILNIPVTTHHNHRRNSNDATGSSSEGEDGNSETQQCRSLTA 331
            |.|....|:: |:.||:|:      ||:|..|.....             |..:|...|.|.:.
Mosquito    81 DQEIVRIYNS-EQNGSITE------LNLPGITEKQWI-------------EHISSVLIQNRKVV- 124

  Fly   332 GHLSLSFSPRTGISAENL-DNMDVTDRISVH--SSQ-------ALTPTLANQSKVVRKRRTRVP- 385
              |..|.|.|   ..|:: |::...|.:::|  |||       .|.|||  :...|.:.....|
Mosquito   125 --LISSLSER---KIEDIYDSIKELDIVALHMISSQFQDCNLLKLFPTL--EELTVSENPLSAPI 182

  Fly   386 --------DKPNYPL-NLWSIIKNCIG----------KDLSKIPMP--VNFNEPLSMLQRLTE-D 428
                    ..||... |::  ..|||.          |||: |.|.  :..:.|  .|::||. .
Mosquito   183 FAQNFQSLTAPNVAFDNIF--FSNCINLVLYHQVISDKDLN-IFMRNWIKGSNP--RLRKLTNAS 242

  Fly   429 FEYSEILDKAA--------QAKDTCEQLAYVTAFTVSS 458
            .|::.::.::.        :.:|.|::..:...|.:.|
Mosquito   243 NEHNRVIVESVFFQGIAYIETRDYCDEDTFDKEFEIKS 280

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4887	NP_608582.2	U2AF_lg	93..>193	CDD:273727
		RRM_SF	255..335	CDD:473069	15/67 (22%)
		ZnF_RBZ	341..364	CDD:197784	6/25 (24%)
		RanBP2-type Zn finger	342..361	CDD:275377	3/19 (16%)
		RRM1_RRM2_RBM5_like	387..473	CDD:409752	20/94 (21%)
		OCRE_RBM5_like	623..678	CDD:293881
		OCRE repeat 1	628..635	CDD:293881
		OCRE repeat 2	636..643	CDD:293881
		OCRE repeat 3	644..651	CDD:293881
		OCRE repeat 4	652..659	CDD:293881
		OCRE repeat 5	661..668	CDD:293881
		G-patch	935..979	CDD:396249
LOC1275439	XP_061509047.1	None