| Sequence 1: | NP_001259859.1 | Gene: | CG4887 / 33304 | FlyBaseID: | FBgn0031318 | Length: | 1004 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_012822835.1 | Gene: | aggf1 / 100145680 | XenbaseID: | XB-GENE-6052300 | Length: | 709 | Species: | Xenopus tropicalis |
| Alignment Length: | 718 | Identity: | 142/718 - (19%) |
|---|---|---|---|
| Similarity: | 243/718 - (33%) | Gaps: | 232/718 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 475 DLEEQQALPKNPKEL----------------AVKDSTVNSGNISAVSPSGLGGNYT--------- 514
Fly 515 -----------LADVPRLAEYSASLYASNPAEHAYYVQYYTEYYTADINKNNR----------DS 558
Fly 559 HLTEANS--------------GAAVALSAIQRKQKKMSSIETTITAAATAAAQAAAQVKA-TLAA 608
Fly 609 QVASAPKGND--GKIYPTPD--VTQ--YQYDETSGYYYDSTTGLYYNAHSQYYYNNETGAYLYWD 667
Fly 668 QRRSTYVLATPASTQAALQEVLADAEQKGEEESKKAKEKEGGNKHDKVKVAKKIVKDMEKWAKQL 732
Fly 733 NQKKDYTAVATPQPILANEVATTSRGNQGGYADVGFSILEKKERGKLNDYAPNPTVGPMNKLVN- 796
Fly 797 -------------AYGGTSDSEE-----------------------------DNAAS-------- 811
Fly 812 -----------------------------SQNTQSSAVVSGGGGAEESD---------------- 831
Fly 832 --YVDFH----KLTCLLCK----RAFQSLEILQKHLKMSTLHKENLAKLNQNTSSSIEEALAYRD 886
Fly 887 RAKERRLKYG-----------ESDPPPPNRSRERFEQEIKTLQSRQKQSTSATPAMPISSSNVGS 940
Fly 941 RLLQKMGWSEGQGLGRKNQGRTQIIEADGRSNYVGLGNKSGQMI----PGNDYKSYIKKMMKQRY 1001
Fly 1002 ENA 1004 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG4887 | NP_001259859.1 | DUF1777 | 115..>196 | CDD:285811 | |
| RRM_SF | 255..335 | CDD:302621 | |||
| ZnF_RBZ | 341..364 | CDD:197784 | |||
| RanBP2-type Zn finger | 342..361 | CDD:275375 | |||
| RRM1_RRM2_RBM5_like | 387..473 | CDD:240759 | |||
| OCRE_RBM5_like | 623..678 | CDD:293881 | 25/58 (43%) | ||
| OCRE repeat 1 | 628..635 | CDD:293881 | 4/8 (50%) | ||
| OCRE repeat 2 | 636..643 | CDD:293881 | 4/6 (67%) | ||
| OCRE repeat 3 | 644..651 | CDD:293881 | 4/6 (67%) | ||
| OCRE repeat 4 | 652..659 | CDD:293881 | 4/6 (67%) | ||
| OCRE repeat 5 | 661..668 | CDD:293881 | 3/6 (50%) | ||
| G-patch | 935..979 | CDD:279867 | 17/43 (40%) | ||
| aggf1 | XP_012822835.1 | COG4191 | <14..>138 | CDD:226654 | 23/127 (18%) |
| OCRE_VG5Q | 225..278 | CDD:293883 | 24/52 (46%) | ||
| OCRE repeat 1 | 230..237 | CDD:293883 | 2/6 (33%) | ||
| OCRE repeat 2 | 238..245 | CDD:293883 | 4/6 (67%) | ||
| OCRE repeat 3 | 246..253 | CDD:293883 | 4/6 (67%) | ||
| OCRE repeat 4 | 254..260 | CDD:293883 | 4/5 (80%) | ||
| OCRE repeat 5 | 263..270 | CDD:293883 | 3/6 (50%) | ||
| FHA | 407..512 | CDD:238017 | 7/104 (7%) | ||
| G-patch | 616..657 | CDD:366717 | 15/40 (38%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 54 | 1.000 | Domainoid score | I11034 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||