DRSC/TRiP Functional Genomics Resources

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Protein Alignment Charon and nfkbie

DIOPT Version :10

Sequence 1:NP_608581.2 Gene:Charon / 33303 FlyBaseID:FBgn0031317 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001073558.1 Gene:nfkbie / 790944 ZFINID:ZDB-GENE-061215-132 Length:343 Species:Danio rerio


Alignment Length:361 Identity:77/361 - (21%)
Similarity:130/361 - (36%) Gaps:110/361 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 KPPVDPTKVPKKRGRKRNTCVPQVVKRSAAEMALKEREEKQLTPVITKRKKRDVTQAQNFESYQI 209
            ||.:|..::.                 |..|.||  ||.::..|.:...:::|            
Zfish    12 KPDLDENRID-----------------SGIEYAL--REPREQFPSLANSEEKD------------ 45

  Fly   210 TNKTPVRRNSTLSDISFNSDELTRVENFISGNTEDRIIRIMANEFRKSHIMSEEGLLPIHEEILH 274
            .:.|..|.:|.....|...|.|   .:||.   |.||.:.                         
Zfish    46 KHSTDERLDSAYGSSSLTVDSL---GDFIE---ECRISKC------------------------- 79

  Fly   275 GDVYGVKRQIFVCCHAKMDINEL--LTRDGEDCLELALTNDTDTEIVSLILD---ARMM--TDHL 332
                   .....|.:.:.::|.|  :|.||:..|.||:.:: :.:....::|   ..:|  .::|
Zfish    80 -------ENATDCQYTEEEVNFLTTVTEDGDTILHLAIIHE-ELKFAQYLVDLFPPELMDIQNNL 136

  Fly   333 YENSNTALHLAVINHINIESIRLLLRRIDLNSLLLTNDDGYTVLHLAVRNNQFLVVEAILDSIDE 397
            |:   |.||||...::.| ::::|:.:  ..||.|.:.||.|.||:|..:..:.....::.:...
Zfish   137 YQ---TPLHLATYLNLPI-AVKILVEK--GVSLELQDQDGNTPLHVACEHGFWECANEMIQNTSP 195

  Fly   398 RELGETVYRRTLEAANPNEWDEKGFAKYYDRAC-------ERLELNKTLLKNRAHKRDVINASEA 455
            .:|.     ..|||.|   |  :|.      .|       :|..|.:.|:||..|    :|..|.
Zfish   196 GKLA-----NVLEAQN---W--RGM------TCLHVATLHKRPRLMRLLMKNGVH----LNIKEG 240

  Fly   456 RGGNPPLFYAVEGEQEHLCYFLLAHLADPDEENLSG 491
            ..|...|..|||.........||...|:.|....:|
Zfish   241 TSGKTALHIAVEQRDVAAVKLLLNKGANVDASMFNG 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CharonNP_608581.2 ANKYR 290..513 CDD:440430 54/216 (25%)
ANK repeat 301..333 CDD:293786 7/36 (19%)
ANK repeat 335..369 CDD:293786 10/33 (30%)
ANK repeat 371..455 CDD:293786 21/90 (23%)
ANK repeat 457..488 CDD:293786 9/30 (30%)
nfkbieNP_001073558.1 ANKYR 93..325 CDD:440430 54/211 (26%)
ANK repeat 101..134 CDD:293786 7/33 (21%)
ANK repeat 138..167 CDD:293786 10/34 (29%)
ANK repeat 208..239 CDD:293786 9/40 (23%)
ANK repeat 242..273 CDD:293786 9/30 (30%)
ANK repeat 275..306 CDD:293786 1/2 (50%)

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