DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Charon and bcl3

DIOPT Version :10

Sequence 1:NP_608581.2 Gene:Charon / 33303 FlyBaseID:FBgn0031317 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_694014.5 Gene:bcl3 / 565656 ZFINID:ZDB-GENE-061013-1 Length:619 Species:Danio rerio


Alignment Length:494 Identity:108/494 - (21%)
Similarity:172/494 - (34%) Gaps:155/494 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 HGKQ----CSCGVQKVDSSTQTDWDTEE---------THMPGITNNS-CEAKGNRHSHMTSSSSE 142
            |.|:    |...|.|   :|||| |..:         |....:|.:| |.::.:.....:|.|..
Zfish    54 HPKESRDTCDGSVSK---TTQTD-DVGDRGNRTRGGPTQTRPVTPSSKCNSQTDAAGKDSSFSKL 114

  Fly   143 PIKP---PVD---PTKVPKKRGRKRNTCVPQVVKRSA-AEMALKEREEKQLTPVITKRKKRDVTQ 200
            ||:.   |||   .|.|...:..|  ..:|:...|.| |.:...........|.|        :.
Zfish   115 PIRKRPFPVDVDHDTSVSHNQSPK--VLIPEETHRDADARLIFNTSCPPYRYPCI--------SW 169

  Fly   201 AQNFESYQITNKTPVRRNSTLSDISFNSDELTRVENFISGNTEDRIIRIMANEFRKSHIMSEEGL 265
            .|::.|.|.....||.        :|:...|.        .:::|::..:|...|:    .|:|.
Zfish   170 PQHYGSPQKPMHMPVP--------TFSPPSLL--------ESKERLLADIAAATRQ----DEDGD 214

  Fly   266 LPIHEEILHGD----VYGVKRQIFVCCHAKMDINELLTRDGEDCLELALTNDTDTEIVSLILDAR 326
            .|:|..::..:    |:.:  :||.|.|..:||...|.   :..|.||:... ...:|..:|||.
Zfish   215 TPLHIAVVQENRALVVWLI--EIFRCAHKDLDIYNNLR---QTPLHLAVITH-QPAVVKALLDAG 273

  Fly   327 MMTDHLYENSNTALHLAVINHINIESIRLLLRRIDLNS---LLLTNDDGYTVLHLAVRNNQFLVV 388
            .....|..|..||.||. ..|...|.:.::||....|:   :.:.|.:|.|.|||||:|....:.
Zfish   274 SDPGALDRNGQTAQHLC-CEHGEAECLSIILRHYSHNNPSHVEIRNYEGLTPLHLAVQNGDQTLT 337

  Fly   389 EAILDSIDERELGETVYRRTLEAANPNEWDEKGFAKYYDRACERLELNKTLLKNRAHKRDVINAS 453
            ..:|||..|                                                    |||.
Zfish   338 GILLDSGAE----------------------------------------------------INAG 350

  Fly   454 EARGGNPPLFYAVEGEQEHLCYFLLAHLADPDEENLSGH-------------------------S 493
            :.:.|..||.:|||.:...:...|:....|.:.::.||:                         |
Zfish   351 DNKSGRSPLVHAVENKSLDMVLLLIERGCDVNAQSYSGNTALHSACGRGHIEMVRVLLKNGADSS 415

  Fly   494 PKSYHYEYARTLRINLKVARVME---------KVISILN 523
            .|:.|.:.|..:..|.||:.|:.         |.||..|
Zfish   416 LKNNHNDTAIMVAKNKKVSDVLRGKGTRSFTGKTISSSN 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CharonNP_608581.2 ANKYR 290..513 CDD:440430 54/250 (22%)
ANK repeat 301..333 CDD:293786 7/31 (23%)
ANK repeat 335..369 CDD:293786 10/36 (28%)
ANK repeat 371..455 CDD:293786 15/83 (18%)
ANK repeat 457..488 CDD:293786 8/30 (27%)
bcl3XP_694014.5 ANKYR 192..438 CDD:440430 68/316 (22%)
ANK repeat 212..247 CDD:293786 10/36 (28%)
ANK repeat 249..280 CDD:293786 8/34 (24%)
ANK repeat 320..351 CDD:293786 15/82 (18%)
ANK repeat 354..385 CDD:293786 8/30 (27%)
ANK repeat 387..418 CDD:293786 3/30 (10%)

Return to query results.
Submit another query.