Protein Alignment Charon and Asb16

DIOPT Version :10

• Sequence 1: NP_608581.2
• Gene: Charon / 33303
• FlyBaseID: FBgn0031317
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001102518.1
• Gene: Asb16 / 498005
• RGDID: 1563878
• Length: 453
• Species: Rattus norvegicus
• Alignment Length: 253
• Identity: 48/253 - (18%)
• Similarity: 80/253 - (31%)
• Gaps: 96/253 - (37%)

  Fly   247 IRIMANEFRKSHIMSEEGLLPIHEEILHGDVYGVKRQIFVCCHAKMDINELLTRDGEDCLELALT 311
            :|::.....|::::|:||:.|:|                 .|.|...:         .|.:|.|.
  Rat   159 VRLLLTFGAKANVLSDEGMTPLH-----------------LCTAPESL---------QCAKLLLE 197

  Fly   312 NDTDTEIVSLILDARMMTDHLYENSNTALHLAVINHINIESIRLLLRRIDLNSLLLTNDDGYTVL 376
            ......:.|            .|:..|.||:|....:. :.:.|.|:            :|..|
  Rat   198 AGASVNVAS------------QESEVTPLHVAAARGLE-QHVALYLQ------------NGADV- 236

  Fly   377 HLAVRNNQFLVVEAILDSIDERELGETVYRRTLEAANPNEWDEKGFAKYYDRACERLELNKTLLK 441
              |:|.:|                |||.                     .:.||...|...:..:
  Rat   237 --ALRTSQ----------------GETA---------------------LNAACAGAEGPGSSRQ 262

  Fly   442 NRAHKRDVINA-----SEARGGNPPLFYAVEGEQEHLCYFLLAHLADPDEENLSGHSP 494
            :.|..|.::.|     :..|..:.||..|.......|...||.|.|.|...|.:||:|
  Rat   263 HEAAARQLLEAGADPQAAGRKRHTPLHNACANGCGGLAELLLRHGASPGVTNGAGHTP 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Charon	NP_608581.2	ANKYR	290..513	CDD:440430	40/210 (19%)
		ANK repeat	301..333	CDD:293786	4/31 (13%)
		ANK repeat	335..369	CDD:293786	6/33 (18%)
		ANK repeat	371..455	CDD:293786	14/88 (16%)
		ANK repeat	457..488	CDD:293786	9/30 (30%)
Asb16	NP_001102518.1	ANKYR	108..327	CDD:440430	48/253 (19%)
		ANK repeat	114..140	CDD:293786
		ANK repeat	142..173	CDD:293786	2/13 (15%)
		ANK repeat	175..204	CDD:293786	9/54 (17%)
		ANK repeat	212..240	CDD:293786	9/43 (21%)
		ANK repeat	242..281	CDD:293786	10/75 (13%)
		ANK repeat	283..314	CDD:293786	9/30 (30%)
		ANK repeat	316..348	CDD:293786	3/5 (60%)
		SOCS_ASB_like	406..446	CDD:239686