DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Charon and NFKBIE

DIOPT Version :10

Sequence 1:NP_608581.2 Gene:Charon / 33303 FlyBaseID:FBgn0031317 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_004547.3 Gene:NFKBIE / 4794 HGNCID:7799 Length:361 Species:Homo sapiens


Alignment Length:284 Identity:69/284 - (24%)
Similarity:115/284 - (40%) Gaps:62/284 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 SDISFNSDELTRVENFISG-NTEDRIIR--------IMANEFRKSHIMSEEGLLPIHEEILHGDV 277
            :|.::.|..||...:.:.| ..||...|        :...:......:||:|...:|..::|   
Human    69 ADSTYGSSSLTYTLSLLGGPEAEDPAPRLPLPHVGALSPQQLEALTYISEDGDTLVHLAVIH--- 130

  Fly   278 YGVKRQIFVCCHAKMDINELLTRDGEDCLELALTNDTDTEIVSLILDARMMTDHLYENSNTALHL 342
              ....:.:||.|      ||.::                    :||   :.::||:   |||||
Human   131 --EAPAVLLCCLA------LLPQE--------------------VLD---IQNNLYQ---TALHL 161

  Fly   343 AVINHINIE-SIRLLLRRIDLNSLLLTNDDGYTVLHLAVRNNQFLVVEAILDSIDERELGETVYR 406
            ||  |::.. ::|.|:  :...|..|.:..|.|.||:|.:.........:|:...|...| |.:.
Human   162 AV--HLDQPGAVRALV--LKGASRALQDRHGDTALHVACQRQHLACARCLLEGRPEPGRG-TSHS 221

  Fly   407 RTLEAANPNEWDEKGFAKYYDRACERLE-LNKTLLKNRAHKRDVINASEARGGNPPLFYAVEGEQ 470
            ..|:..|   |  :|.|..:....::.: |.:.||:|.|.    |:..|...|...|..|||.::
Human   222 LDLQLQN---W--QGLACLHIATLQKNQPLMELLLRNGAD----IDVQEGTSGKTALHLAVETQE 277

  Fly   471 EHLCYFLLAHLADPDEENLSGHSP 494
            ..|..|||...|..|...|:|.:|
Human   278 RGLVQFLLQAGAQVDARMLNGCTP 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CharonNP_608581.2 ANKYR 290..513 CDD:440430 54/207 (26%)
ANK repeat 301..333 CDD:293786 2/31 (6%)
ANK repeat 335..369 CDD:293786 12/34 (35%)
ANK repeat 371..455 CDD:293786 20/84 (24%)
ANK repeat 457..488 CDD:293786 11/30 (37%)
NFKBIENP_004547.3 ANKYR 116..357 CDD:440430 61/237 (26%)
ANK repeat 119..152 CDD:293786 10/66 (15%)
ANK repeat 154..185 CDD:293786 14/37 (38%)
ANK repeat 187..228 CDD:293786 10/41 (24%)
ANK repeat 231..261 CDD:293786 8/33 (24%)
ANK repeat 264..295 CDD:293786 11/30 (37%)
ANK repeat 297..328 CDD:293786 2/5 (40%)

Return to query results.
Submit another query.