DRSC/TRiP Functional Genomics Resources

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Protein Alignment Charon and asb7

DIOPT Version :10

Sequence 1:NP_608581.2 Gene:Charon / 33303 FlyBaseID:FBgn0031317 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_999895.1 Gene:asb7 / 405798 ZFINID:ZDB-GENE-040426-2429 Length:318 Species:Danio rerio


Alignment Length:280 Identity:63/280 - (22%)
Similarity:102/280 - (36%) Gaps:76/280 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 RKSHIMSEEGLLPIHEEILHGDVYGVKRQIFVCCHAKM-DIN--ELL----TRDGEDCLELALTN 312
            |::..:.||  |.|...:..||||.|::.:......|: |.|  .||    .:..|.|:.:.|.:
Zfish     7 RRNPELQEE--LQIQAAVAAGDVYTVRKMLEQGYSPKIRDANGWTLLHFSAAKGKERCVRVFLEH 69

  Fly   313 DTD---------------------TEIVSLILDARMMTDHLYENSN---TALHLAVINHINIES- 352
            ..|                     ..|..|:|::...:|.:...||   |.||:|.  |...:| 
Zfish    70 GADPTVKDFIGGFTALHYAAMHGRARIARLMLESEYRSDIINAKSNDGWTPLHVAA--HYGRDSF 132

  Fly   353 IRLLLR-RIDLNSLLLTNDDGYTVLHLAVRNNQFLVVEAILDSIDERELGETVYRRTLEAANPNE 416
            :||||. :.:::.|   :|.|.|.|.||:...:...|..:||.                  |.|.
Zfish   133 VRLLLEFKAEVDPL---SDKGTTPLQLAIIRERSSCVRILLDH------------------NANI 176

  Fly   417 WDEKGFAKYYDRACERLELNKTLLK-NRAHKRDVI------NASEARGGNPPLFYAVEGEQEHLC 474
            ..:.||...|           .::| |.::.|..:      |......|..||..:...:.....
Zfish   177 DIQNGFLLRY-----------AVIKGNHSYCRMFLQRGADTNLGRLEDGQTPLHLSALRDDVQCA 230

  Fly   475 YFLLAHLADPDEENLSGHSP 494
            ..|..:.||.:..|..|.:|
Zfish   231 QMLYTYGADTNMRNYEGQTP 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CharonNP_608581.2 ANKYR 290..513 CDD:440430 53/245 (22%)
ANK repeat 301..333 CDD:293786 8/52 (15%)
ANK repeat 335..369 CDD:293786 13/38 (34%)
ANK repeat 371..455 CDD:293786 17/90 (19%)
ANK repeat 457..488 CDD:293786 6/30 (20%)
asb7NP_999895.1 ANKYR 16..250 CDD:440430 59/267 (22%)
ANK repeat 46..77 CDD:293786 7/30 (23%)
ANK repeat 81..114 CDD:293786 4/32 (13%)
ANK repeat 116..147 CDD:293786 11/35 (31%)
ANK repeat 149..180 CDD:293786 10/48 (21%)
ANK repeat 213..244 CDD:293786 6/30 (20%)
SOCS_ASB7 273..317 CDD:239696
Blue background indicates that the domain is not in the aligned region.

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