DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tfb4 and AT1G18340

DIOPT Version :9

Sequence 1:NP_608574.2 Gene:Tfb4 / 33294 FlyBaseID:FBgn0031309 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_564050.1 Gene:AT1G18340 / 838415 AraportID:AT1G18340 Length:301 Species:Arabidopsis thaliana


Alignment Length:290 Identity:107/290 - (36%)
Similarity:160/290 - (55%) Gaps:31/290 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ASKEAESCIDLLVIVLDTNPSQHFVRQNPQNLTQILEAVIAFGNAHLMQKAQNKLAVVSCSHHAT 71
            |||:....:.|||::|||||.  |........:|.|..|:||.||.|.....|::.|::..:.:.
plant     5 ASKQYSDDVSLLVLLLDTNPL--FWSTTSITFSQFLSHVLAFLNAVLGLNQLNQVVVIATGYSSC 67

  Fly    72 NFLYPLPRRQVELRQVDGQYEA---------FNLVEK-----TVKQQLGSILMNAPRLSAPCESL 122
            :::|     ...|....|.:|:         .:|::|     |..::|....::..|:.: |  |
plant    68 DYIY-----DSSLTSNHGNFESNGTGMPAIFGSLLKKLEEFVTKDEELSKEEVSEDRIPS-C--L 124

  Fly   123 LAGSMSMALCYISRLQR--NLAPGVKMHSRILVVTGSNECASQYMTFMNVFFTAQKLGITIDTCA 185
            |:||:|||||||.|:.|  :|.|    ..|||.:.||.:...||:..||..|:||:|.:.||:|.
plant   125 LSGSLSMALCYIQRVFRSGHLHP----QPRILCLQGSPDGPEQYVAVMNSIFSAQRLMVPIDSCY 185

  Fly   186 LD-KTLSLLQQGCDITSGQFLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDYRASCFCHR 249
            :. :..:.|||...||.|......|||||.|||..:|......|..:.||.|..||:|||||||:
plant   186 IGVQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFVQLPKPIGVDFRASCFCHK 250

  Fly   250 ELIDIGYVCSVCLSVFCKYSPICTTCHTIF 279
            :.||:||:||||||:||::...|:||.::|
plant   251 KTIDMGYICSVCLSIFCEHHKKCSTCGSVF 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tfb4NP_608574.2 Tfb4 15..276 CDD:281798 102/277 (37%)
AT1G18340NP_564050.1 Tfb4 22..277 CDD:397778 97/268 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1400
eggNOG 1 0.900 - - E1_COG5242
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1160
Inparanoid 1 1.050 160 1.000 Inparanoid score I1641
OMA 1 1.010 - - QHG56022
OrthoDB 1 1.010 - - D1220881at2759
OrthoFinder 1 1.000 - - FOG0004351
OrthoInspector 1 1.000 - - oto3983
orthoMCL 1 0.900 - - OOG6_103072
Panther 1 1.100 - - LDO PTHR12831
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3069
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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