DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tfb4 and gtf2h3

DIOPT Version :9

Sequence 1:NP_608574.2 Gene:Tfb4 / 33294 FlyBaseID:FBgn0031309 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001121894.1 Gene:gtf2h3 / 436837 ZFINID:ZDB-GENE-040718-302 Length:296 Species:Danio rerio


Alignment Length:285 Identity:138/285 - (48%)
Similarity:185/285 - (64%) Gaps:6/285 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IDLLVIVLDTNP---SQHFVRQNPQNLTQILEAVIAFGNAHLMQKAQNKLAVVSCSHHATNFLYP 76
            |::||||||.||   .|...|:....|:..|::::...||||:....|||||::..:|.::||||
Zfish     7 INILVIVLDVNPVWWGQQAQREPKFTLSACLDSLMVLANAHLVMSRTNKLAVITSLYHESHFLYP 71

  Fly    77 LP--RRQVEL-RQVDGQYEAFNLVEKTVKQQLGSILMNAPRLSAPCESLLAGSMSMALCYISRLQ 138
            ..  |...|: ...||:||..::......:::.:::..|....:..|:|||.|::.|||||:|:.
Zfish    72 SKQWRSGEEISANPDGKYELLSVTNDLFAEEIRNLMERAEVSGSQTETLLAVSLARALCYINRIS 136

  Fly   139 RNLAPGVKMHSRILVVTGSNECASQYMTFMNVFFTAQKLGITIDTCALDKTLSLLQQGCDITSGQ 203
            :::..|.::.|||||:..:.:..||||.||||.|.|||..|.||.|.||....||||.||||.|.
Zfish   137 KDVQAGQEVKSRILVIKAAEDSTSQYMNFMNVIFAAQKKNILIDACVLDSDSGLLQQACDITGGL 201

  Fly   204 FLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDYRASCFCHRELIDIGYVCSVCLSVFCKY 268
            :|:|.|...|.|||||||||..:.|.:|:||||..|||||:|||||.||:||||||||||:||.:
Zfish   202 YLRVPQKVALTQYLLWVFLPDAEQRSQLLLPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNF 266

  Fly   269 SPICTTCHTIFKNPGPLPIKGKKKK 293
            |||||||.|.||.|.|...|.||||
Zfish   267 SPICTTCETAFKMPLPQMAKTKKKK 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tfb4NP_608574.2 Tfb4 15..276 CDD:281798 127/266 (48%)
gtf2h3NP_001121894.1 Tfb4 7..274 CDD:281798 127/266 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586377
Domainoid 1 1.000 250 1.000 Domainoid score I2073
eggNOG 1 0.900 - - E1_COG5242
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1160
Inparanoid 1 1.050 267 1.000 Inparanoid score I3012
OMA 1 1.010 - - QHG56022
OrthoDB 1 1.010 - - D1220881at2759
OrthoFinder 1 1.000 - - FOG0004351
OrthoInspector 1 1.000 - - otm24711
orthoMCL 1 0.900 - - OOG6_103072
Panther 1 1.100 - - LDO PTHR12831
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1503
SonicParanoid 1 1.000 - - X3069
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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