DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tfb4 and GTF2H3

DIOPT Version :9

Sequence 1:NP_608574.2 Gene:Tfb4 / 33294 FlyBaseID:FBgn0031309 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001507.2 Gene:GTF2H3 / 2967 HGNCID:4657 Length:308 Species:Homo sapiens


Alignment Length:299 Identity:137/299 - (45%)
Similarity:182/299 - (60%) Gaps:17/299 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ESCIDLLVIVLDTNP---SQHFVRQNPQNLTQILEAVIAFGNAHLMQKAQNKLAVVSCSHHATNF 73
            |..::|||||:|.||   .:..::::...|::.::||:..||:||.....|||||::.....:.|
Human     5 EDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRF 69

  Fly    74 LYP-----------LPRRQVELR---QVDGQYEAFNLVEKTVKQQLGSILMNAPRLSAPCESLLA 124
            |||           .|....|..   ..||:||......:.:.:::..::..:.......|:|||
Human    70 LYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMTKSDIKGQHTETLLA 134

  Fly   125 GSMSMALCYISRLQRNLAPGVKMHSRILVVTGSNECASQYMTFMNVFFTAQKLGITIDTCALDKT 189
            ||::.|||||.|:.:.:....:|.|||||:..:.:.|.|||.||||.|.|||..|.||.|.||..
Human   135 GSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSD 199

  Fly   190 LSLLQQGCDITSGQFLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDYRASCFCHRELIDI 254
            ..||||.||||.|.:|||.|:..|||||||||||....|.:|:||||..|||||:|||||.||:|
Human   200 SGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEI 264

  Fly   255 GYVCSVCLSVFCKYSPICTTCHTIFKNPGPLPIKGKKKK 293
            |||||||||:||.:|||||||.|.||...|..:|.||||
Human   265 GYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAKKKK 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tfb4NP_608574.2 Tfb4 15..276 CDD:281798 126/277 (45%)
GTF2H3NP_001507.2 tfb4 7..289 CDD:273181 128/281 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151815
Domainoid 1 1.000 248 1.000 Domainoid score I2152
eggNOG 1 0.900 - - E1_COG5242
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1160
Inparanoid 1 1.050 263 1.000 Inparanoid score I3094
Isobase 1 0.950 - 0 Normalized mean entropy S1938
OMA 1 1.010 - - QHG56022
OrthoDB 1 1.010 - - D1220881at2759
OrthoFinder 1 1.000 - - FOG0004351
OrthoInspector 1 1.000 - - oto89117
orthoMCL 1 0.900 - - OOG6_103072
Panther 1 1.100 - - LDO PTHR12831
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3069
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.720

Return to query results.
Submit another query.