DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)10685 and CG8545

DIOPT Version :10

Sequence 1:NP_608573.1 Gene:l(2)10685 / 33293 FlyBaseID:FBgn0283525 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_610786.2 Gene:CG8545 / 36365 FlyBaseID:FBgn0033741 Length:891 Species:Drosophila melanogaster


Alignment Length:501 Identity:108/501 - (21%)
Similarity:178/501 - (35%) Gaps:166/501 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 GDTEQTCAMLES-DGAINMKSLINLAQDRVKDSTETVPEQGKSRHEIESKLDALLRKQQEREVAS 135
            ||.|:.   ||| |....:..|.:|:.|...:|.:.....|:   |..::.|:...:.::.:   
  Fly   172 GDDEEG---LESDDDTAQVGKLADLSDDDDANSDDDFDISGE---EDGAQADSDEEEDEDDD--- 227

  Fly   136 IYPSSPEDGSSAPLPLE-----LKFDNVEEDQ---PEQVNNPFKQSL------TKALEEDVKLDE 186
               ...:|.....||:|     ||....||.|   .|.:....||.:      .:..|:|:.|.|
  Fly   228 ---DDDDDDDDDKLPIERANKKLKKREAEEAQLADDEMLETVDKQDVFQLPVEGEETEKDLTLQE 289

  Fly   187 --HRLVDPQFGTGGLYEYMPAHSIKG--------------------ME---DWVAESEHYKYYQT 226
              .|:.|..........|..|...:|                    ||   |.:..:|..:|.:.
  Fly   290 VQQRIKDVSLVLSDFKRYRQADRSRGEYIDLLRRDLCLYYSYNEFLMEKLMDMLPLTELMEYLEA 354

  Fly   227 S-ADFPLAIEPE--------------------------------------PSFHYPEHLSLYTYE 252
            | ...||.|...                                      |....||:|:     
  Fly   355 SEIARPLTIRTNTLKTRRRDLAGALINRGVNLDPLGKWTKVGLVVFNSQVPLGATPEYLA----- 414

  Fly   253 MGNCSDFKGPKKCMTGVLSHFMMDGAST-LPPLFLQVKPGERVLDACASPGGKSLLMLQTLHLDH 316
                              .|:|:.|||: ||.:.|..:..||:||.|::||||.      .|:..
  Fly   415 ------------------GHYMIQGASSLLPVMALAPQENERILDMCSAPGGKG------SHIAS 455

  Fly   317 LVCND----IQESRLNKLRKVMQEYLFDYKERWAGKRLILSQSDA---RNLDQYEQFDKILVDVP 374
            ::.|.    ..:|..::::.::..:     .|......::|..|.   ||:  ...||::|:|.|
  Fly   456 IMKNTGVLFANDSNRDRIKAIVANF-----HRLGIVNAVVSCEDGTKFRNI--MTGFDRVLLDAP 513

  Fly   375 CTTDRHVLNEQDNNIFKPTRIK-ERLRIPELQAGILANCLRLL----RPGGSLVYSTCSLSPIQN 434
            ||....|  .:|.:: |.|:.: :..|...||..:|...:...    ..||.:||||||:.|.:|
  Fly   514 CTGTGVV--SKDPSV-KTTKSEVDVQRCYNLQRKLLLTAIDCTDAKSSTGGYIVYSTCSVLPEEN 575

  Fly   435 DGVVHMALQKVFTEYGITTTIKDLSRHTALFSDVFKFEHPKGLKYG 480
            :.|:..||:|               |:..|.        |.||.:|
  Fly   576 EWVIDYALKK---------------RNVKLV--------PTGLDFG 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)10685NP_608573.1 RsmB <276..444 CDD:439914 51/180 (28%)
CG8545NP_610786.2 nop2p 363..637 CDD:188051 65/298 (22%)
PRK13808 <745..886 CDD:172341
Blue background indicates that the domain is not in the aligned region.

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