DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)10685 and nop2

DIOPT Version :10

Sequence 1:NP_608573.1 Gene:l(2)10685 / 33293 FlyBaseID:FBgn0283525 Length:503 Species:Drosophila melanogaster
Sequence 2:XP_002941729.1 Gene:nop2 / 100490904 XenbaseID:XB-GENE-962291 Length:749 Species:Xenopus tropicalis


Alignment Length:514 Identity:109/514 - (21%)
Similarity:179/514 - (34%) Gaps:185/514 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 DRVKDSTETVPEQGKSRHEIESKL-----DALLRKQQEREVASIYPSSPEDGSSAPLPLELKFDN 157
            |..:|:.|  .|:|....|:|:.:     :.:..|..|||.|. ..|..|||.          |.
 Frog   111 DSEEDNEE--EEEGDEMEEVENGMEEEVDEEMEEKSDEREDAE-EESEDEDGD----------DE 162

  Fly   158 VEE--DQPEQVNNPFKQSLTKALEEDVKLDEHRLVDPQFGT--GGLYEYMPAHSIKGMEDWVAES 218
            .||  |:.|..:..|.:||:.:..:|::.|        :||  |...:.:|.......|....:|
 Frog   163 EEEDGDEEEDGDGEFGESLSLSDSDDLQDD--------YGTSSGDEKDLLPIERASKKEKKKQKS 219

  Fly   219 EHYKYYQTSADFPLAIEPEPSFHYP---------------------------------------- 243
            |.....:.|. ..|.::.|..|..|                                        
 Frog   220 EEALTGEEST-IQLNVDSEELFQLPTEEELEKELSTAPDLVTVQERIKDIVGVLQNFAQRGGGRT 283

  Fly   244 --EHLSL--------YTY------------EMGNCSDF------KGP------------------ 262
              |:|.:        |:|            .:....||      :.|                  
 Frog   284 RQEYLKVLKKDLATYYSYGDYMIETLSELFPVSELVDFLEACEVQRPITIRTNTLKTRRRDLAQA 348

  Fly   263 ------------KKCMTGVL----------------SHFMMDGAST-LPPLFLQVKPGERVLDAC 298
                        |...||::                .|:|:.|||: ||.:.|..:..|||||.|
 Frog   349 LINRSVNLDPLGKWSKTGLVIYDSSVPIGATPEYLAGHYMLQGASSLLPVIALAPQENERVLDMC 413

  Fly   299 ASPGGKSLLMLQTL-HLDHLVCNDIQESRLNKLRKVMQEYLFDYKERWAGKRLILSQSDARNLDQ 362
            .:||||:..|.|.: :...:|.||:...|   ||.|:...     .|......|:|..|.|.:.:
 Frog   414 CAPGGKTSYMAQLMKNTGIVVANDMNADR---LRSVVGNL-----HRLGVTNCIISNYDGRQISK 470

  Fly   363 -YEQFDKILVDVPCTTDRHVLNEQDNNIFKPTRIKERLRIPELQAGILANCLRLL----RPGGSL 422
             ...||::|:|.||:....:  .:|..:.....:::..|...:|..::.:.:..|    :.||.:
 Frog   471 VLGGFDRVLLDAPCSGTGII--SKDPAVKTNKSVQDVQRCAHIQKELILSAIDALDAQSQTGGFM 533

  Fly   423 VYSTCSLSPIQNDGVVHMALQKVFTEYGITTTIKDLSRHTALFSDVFKFEHPKGLKYGQ 481
            ||.|||::..:|:.||..||:|               |:..|.        |.||.:|:
 Frog   534 VYCTCSITVEENECVVDYALKK---------------RNVKLV--------PTGLDFGK 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)10685NP_608573.1 RsmB <276..444 CDD:439914 52/174 (30%)
nop2XP_002941729.1 nop2p 333..607 CDD:188051 64/270 (24%)
valS <613..725 CDD:237855
Blue background indicates that the domain is not in the aligned region.

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