DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS3 and SPCPB1C11.03

DIOPT Version :9

Sequence 1:NP_608572.1 Gene:MFS3 / 33292 FlyBaseID:FBgn0031307 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001342988.1 Gene:SPCPB1C11.03 / 2539453 PomBaseID:SPCPB1C11.03 Length:570 Species:Schizosaccharomyces pombe


Alignment Length:502 Identity:101/502 - (20%)
Similarity:167/502 - (33%) Gaps:147/502 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YVLALLGSIGMAIVYGLKVNLSVAMVAMVNHTAIKAHGDGGGHGGHGSVILSNASQVSLVEECNP 84
            |:|.:||.:.|.:..| |..||.:.:                              :.|.::.:.
pombe   101 YLLLMLGFLDMMLFIG-KATLSYSTI------------------------------LGLFDDVHI 134

  Fly    85 PGGASNVTAKVEDGPFDWSEPLQGTLLSCYFWGYLVSQIPLAHVAENFS-AKWVMLFSVAINVVC 148
            .....|                  .|.:.::.||:|.|.|..::.:.|. .|:|.|.:.:.:|:.
pombe   135 TSNQYN------------------NLNTLFYVGYIVGQFPGHYIMQTFPLGKFVGLVTFSWSVIV 181

  Fly   149 TLLTPVFTELHYGGLILMRVLEGVGGGASFPAMHVMIASWAPPTERMVMSTIIYVG-TSAGTALS 212
            .|....:   :|||||.:|...|.......|||...:..:....|:..:..:.::. .|.|....
pombe   182 FLHCCAY---NYGGLIALRFFLGFTESCLLPAMEATMGMFFTHQEQAFLQPVFWISCLSCGIPAG 243

  Fly   213 ILLAG---VCSAQWGWESVFYVMGALSCIWMLLWVILVQDNPNKQRFISLEERQMITSSL----- 269
            .:..|   |..:...|:....:.|.::....:.......|||:|.||::.||:......:     
pombe   244 FIAYGLEFVTKSIAPWKLFMIITGGITFFLSIFLFFYYPDNPSKARFLTDEEKLYTIDRVRKSTR 308

  Fly   270 -GTEQK--TEHH------PAVPWGKVFTSVPFWAILIAHTCSNFGWYMFLIEIPFYMKQVLKFNV 325
             |.|.|  .:|.      ..:.|  :||...|..:|    .:|..:...||        ....||
pombe   309 GGIENKIFKKHQFIEALKDPITW--LFTFAAFTLML----SNNLAYQQNLI--------FTSLNV 359

  Fly   326 ASNAALSALPYFPMIIFSICLGKLLDSLQAKGKITTTVARKTATSICTLIPGVCLLVLCYIGCRH 390
            :.                  |...|..:...|  ..||:...||....|||....          
pombe   360 SD------------------LNSTLVGVALAG--YNTVSAIIATFAMYLIPNQSA---------- 394

  Fly   391 YEAVSVMSVGIVAMGSMFSGF-LSNHID------IAPNFAGT-LVALTNTAATLPGIVVPLFVGF 447
            |.|:..|...|.. |..|... .||.|.      ||.:|..| ::||..|.||..|....|    
pombe   395 YHAMFWMLPSITG-GIAFVALPWSNRIGELATMIIASDFGITYIIALGWTTATSTGYTKKL---- 454

  Fly   448 VTKGNQNIGAWRIIFGVTIVLFALEFLVFVFLGSGSEQPWNKAGTPK 494
             |:|        ::|   :|.:|:..::       |.|.|.....|:
pombe   455 -TRG--------LMF---MVGYAIANII-------SPQLWQSRDAPR 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS3NP_608572.1 2A0114euk 19..489 CDD:129972 100/495 (20%)
MFS 100..479 CDD:119392 86/405 (21%)
SPCPB1C11.03NP_001342988.1 UhpC 102..494 CDD:332119 100/501 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

Return to query results.
Submit another query.