DRSC/TRiP Functional Genomics Resources

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Protein Alignment MFS3 and cima-1

DIOPT Version :9

Sequence 1:NP_608572.1 Gene:MFS3 / 33292 FlyBaseID:FBgn0031307 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001294208.1 Gene:cima-1 / 24104589 WormBaseID:WBGene00018473 Length:543 Species:Caenorhabditis elegans


Alignment Length:457 Identity:101/457 - (22%)
Similarity:188/457 - (41%) Gaps:51/457 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NLSVAMVAMVNHTAIKAHGDGGGHGGHGSVILSNASQVSLVEECNPPGGASNVTAKVEDGPFDWS 103
            ||:||::.|   |:...||.|                                      |..:|.
 Worm    87 NLAVALICM---TSCPVHGYG--------------------------------------GTLEWQ 110

  Fly   104 EPLQGTLLSCYFWGYLVSQIPLAHVAENFSAKWVMLFSVAINVVCTLLTPVFTELHYGGLILMRV 168
            ...:|.:|:....|.|: .|.....|:..:.||::...:.:..:..|:.|:.....:...:|.|:
 Worm   111 SQQEGLVLAAQNAGSLI-MIVTGMWADRLNGKWMVFIGLLLCCIGNLMLPLLASKSFWFAVLARI 174

  Fly   169 LEGVGGGASFPAMHVMIASWAPPTERMVMSTIIYVGTSAGTALSILLAG-VCSAQ---WGWESVF 229
            ..|.......||::.:|..|.|..||.....:|..|...||...:..|| :|:.:   .||.::|
 Worm   175 SIGASDACLMPAVNSLITRWFPQAERPAAIGLISGGRQIGTLFILPTAGYLCTRKDILDGWPAIF 239

  Fly   230 YVMGALSCIWMLLWVILVQDNPNKQRFISLEERQMITSSLGTE---QKTEHHPAVPWGKVFTSVP 291
            |:...:|.:..:.|:....|.|.||..||..|::.|.:.:..|   ::|:....||:|.:..|.|
 Worm   240 YLSATISVLVTVFWIPFGADKPAKQICISSREKEFIETRIACESIGKRTDRTRRVPYGAMLHSKP 304

  Fly   292 FWAILIAHTCSNFGWYMFLIEIPFYMKQVLKFNVASNAALSALPYFPMIIFSICLGKLLDSLQAK 356
            .||.:.|..|..:...:.|..:|.||:.||:|....|..::|||...:.:.......|...|..|
 Worm   305 LWACIFALICHEYPLVIMLQFLPNYMRDVLEFAPTKNGIIAALPILCLFLSKTFSSSLSSYLTTK 369

  Fly   357 GKITTTVARKTATSICTLIPGVCLLVLCYIGCRH-YEAVSVMSVGIVAMGSMFSGFLSNHIDIAP 420
            .::..|...|...::.:....:|:..:.:..... :.||..:...::..|....|.::..:.|||
 Worm   370 LRLDKTFVCKGFNAVASAGLAICISFVPFFNKESAFLAVFCLCGAMIFAGLHTPGVITAMVQIAP 434

  Fly   421 NFAGTLVALTNTAATLPGIVVPLFVGFVTKGNQNIGAWRIIFGVTIVLFALEFLVFVFLGSGSEQ 485
            .|:|.:...:..|.....|...:...::.:.. ::..|.::|.|:.::.||..:||...||...:
 Worm   435 AFSGIITGWSFFAVAWFSIGNKILTKYIVQSG-SVTEWGMVFRVSALVAALPVIVFTIWGSADRE 498

  Fly   486 PW 487
            .|
 Worm   499 WW 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS3NP_608572.1 2A0114euk 19..489 CDD:129972 101/457 (22%)
MFS 100..479 CDD:119392 88/386 (23%)
cima-1NP_001294208.1 2A0114euk 63..506 CDD:129972 101/457 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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