DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS3 and F56A4.10

DIOPT Version :9

Sequence 1:NP_608572.1 Gene:MFS3 / 33292 FlyBaseID:FBgn0031307 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001303739.1 Gene:F56A4.10 / 186353 WormBaseID:WBGene00018918 Length:470 Species:Caenorhabditis elegans


Alignment Length:414 Identity:95/414 - (22%)
Similarity:158/414 - (38%) Gaps:82/414 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 GYLVSQIPLAHVAENFSAKWVMLFSVAINVVCTLLTPVFTELHYGGLILMRVLEGVGGGASFPAM 181
            |.|:..:|......:...:.....|..|:.:.:.|.|:...:.:....|.|||:|:|....|.|:
 Worm    98 GGLIGLVPSVPQISSIGLRNTQTISGFISGLGSFLFPLAVSVGFYTSFLCRVLQGIGAAVLFTAV 162

  Fly   182 HVMIASWAPPTERMVMSTIIYVGTSAGTALSILLAG-VCSAQWGWESVFYVMGALSCIWMLLWVI 245
            .|:...|||.:|.....:|:.........:.:.::| :|.:..||.|::|:.||::.:...::..
 Worm   163 GVVPGVWAPKSEANTFMSILACAFQLSNVICMPVSGLLCESAVGWRSIYYISGAITFVLYTVFWF 227

  Fly   246 LVQDNPNKQRFISLEERQMITSSLGTEQKTEHHPAVPWGKVFTS---VPFWAILIAHTCSNFGWY 307
            ...|:|...|.:|.:|.:.|  |.|..:|.:.  .||:..|.|.   :..|..|..   .|.|:|
 Worm   228 TYTDDPKLHRNVSQKELRKI--STGKVEKIKE--PVPYFAVSTDPTVIISWISLFG---GNMGFY 285

  Fly   308 MFLIEIPFYMKQVLKFNVASNAALSALPYFPMIIFSICLGKLLDSLQAKGKITTTVARKTATSIC 372
            :..|..|.|:::||||:|.....|:|||:....|.....|::.|.|       |.::.:      
 Worm   286 VLCIYGPTYLREVLKFDVKETGFLTALPFILSAIAKFSAGRISDKL-------TGLSER------ 337

  Fly   373 TLIPGVCLLVLCYIGCRHYEAVSVMSVGIVAMGSMFSGFLSNHI--DIAPNFA------------ 423
                           .|.....|:..:|:|| |.:...|.:|.:  .||.|||            
 Worm   338 ---------------ARFVFFASIFQIGLVA-GLVVMAFTTNRVIAQIAFNFAIVSSGLNIMGVV 386

  Fly   424 ------------GTLVALTNTA-------ATLPGIVVPLFVGFVTKGNQNIGAWRIIFGVTIVLF 469
                        .||..::.||       .||..|:.|         |.....|:..|.|...|.
 Worm   387 KCVQLRCLQHVHYTLTVMSFTAYASQFLSPTLVSIICP---------NYTNEQWKTFFLVISGLI 442

  Fly   470 ALEFLVFVFLGSGSEQPWNKAGTP 493
            ......|.||.......:.|...|
 Worm   443 VACNAGFPFLARSDAAGYTKKQEP 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS3NP_608572.1 2A0114euk 19..489 CDD:129972 93/408 (23%)
MFS 100..479 CDD:119392 91/398 (23%)
F56A4.10NP_001303739.1 MFS 52..453 CDD:391944 92/399 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.